| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_1568 |
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| Symbol | |
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| ID | 7974797 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 1695057 |
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| End bp | 1696199 |
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| Gene Length | 1143 bp |
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| Protein Length | 380 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 644792168 |
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| Product | Rieske (2Fe-2S) domain protein |
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| Protein accession | YP_002943485 |
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| Protein GI | 239814575 |
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| COG category | [P] Inorganic ion transport and metabolism
[R] General function prediction only |
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| COG ID | [COG4638] Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCTGATT TAAGTCTTCA ACTGCAGCAG GCCACGAGCC AACTTCCAGT TTCCGCGTAC
TTCGACGAGT CGCTCTACGC GCGCGAGATG CAAACGCTGT TCGCGCAGGG CCCGCGCTAT
GTGGGCCACC GGTTGGCCGT GCCCGAGCCC GGCAACTTCC ACACCCTGCC GCAGGAGCAC
CAGGGCCGCG CGCTGGTGCA CACGCCCAAG GGCGTGGAAC TCATCTCCAA CGTGTGCCGC
CACCGCCAGG CGCTCATTCT CCAGGGCCGC GGCCAGCTCG ACAGCCAGGC CGGCGGCAAC
ATCGTCTGCC CGCTGCACCG CTGGACCTAT GCGGCCAGCG ATGCGCGCAC CACCGGCACG
CTGATCGGCG CGCCGCACTT CCAGCAGGAT CCCTGCCTCA ACCTGCACAA CTACCCGCTC
ACCGAGTGGA ACGGCCTGCT GTTCGAGCGC GGTCCCGATG GCGCAGGGCG CGACGTGGCG
GCCGACATGG CCGAGCTCGG CCCGCGCGCC GACCTCGACT TCACGGGCTA CGCGCTCGAC
CGCGTCGAGC TGCACGAGTG CAACTACAAC TGGAAGACCT TCATCGAGGT CTATCTGGAG
GACTACCACG TCGGCCCGTT CCACCCGGGC CTGGGCAGCT TCGTCACCTG CGACGACCTG
CGCTGGGAGT TCAACCGCAA CTTCTCGGTG CAGACCGTGG GCGTGGCCAA CCGGCTCGGC
CGCGCGGGCA GCCCGATCTA CCAGAAGTGG CAGGAGCAGC TGCTCAAGTA CCGCGAAGGC
AAGCCGCCCA AGTACGGCGC CATCTGGCTC ACCTACTACC CGCACGTGAT GATCGAGTGG
TATCCGCATG TGCTCACGGT GTCGACGCTG CATCCGGTGA GCCCTACCAG GACGCTCAAC
ATGGTGGAGT TCTTCTACCC CGAGGAGATC GTGGCCTTCG AGCGCGAATT CGTCGAGGCC
CAGCAGGCCG CCTACATGGA AACCTGCGTG GAGGACGACG AGATCGCCGA GCGCATGGAC
GCCGGCCGCC GCGCGCTCAT GCTGCGCGGC GACGACGAGA GCGGCCCCTA CCAGAGCCCG
ATGGAAGACG GCATGCAGCA GTTCCACGAG TGGTACCGCA GCGCAATGCA GAACAACGCC
TGA
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| Protein sequence | MSDLSLQLQQ ATSQLPVSAY FDESLYAREM QTLFAQGPRY VGHRLAVPEP GNFHTLPQEH
QGRALVHTPK GVELISNVCR HRQALILQGR GQLDSQAGGN IVCPLHRWTY AASDARTTGT
LIGAPHFQQD PCLNLHNYPL TEWNGLLFER GPDGAGRDVA ADMAELGPRA DLDFTGYALD
RVELHECNYN WKTFIEVYLE DYHVGPFHPG LGSFVTCDDL RWEFNRNFSV QTVGVANRLG
RAGSPIYQKW QEQLLKYREG KPPKYGAIWL TYYPHVMIEW YPHVLTVSTL HPVSPTRTLN
MVEFFYPEEI VAFEREFVEA QQAAYMETCV EDDEIAERMD AGRRALMLRG DDESGPYQSP
MEDGMQQFHE WYRSAMQNNA
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