Gene Vapar_1565 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVapar_1565 
Symbol 
ID7974794 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVariovorax paradoxus S110 
KingdomBacteria 
Replicon accessionNC_012791 
Strand- 
Start bp1692592 
End bp1693173 
Gene Length582 bp 
Protein Length193 aa 
Translation table11 
GC content66% 
IMG OID644792165 
ProductABC-type metal ion transport system, periplasmic component/surface adhesin 
Protein accessionYP_002943482 
Protein GI239814572 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCAAGA CCCGACTTCG ACGACGCATT TCATCCGGCT TCGCATTGGC CGCGGCGCTG 
TTCGCAGCCC CCTTTCTTTC CGCCCAGGCG CAGCAGCAGC ATGCGCATGT GCACGGCCAG 
CTCAAGCTCG ATGTGGCGAT CGACGGACCC ACGGTGGTGA TCGACATGGA ATCGCCACTG 
GACAACATCG TCGGCTTCGA GCGCGCGCCC AAGACCGACG CCGAGAAGAA GACCGCCGAA 
GACGCTATCG CCCAGCTGCG CGCAGCCGAC AAGCTGTTTG CCATCGACCC GGCCGCCAAC 
TGCAAGCTCG GCCCGGTCGA GCTGCGCTCC AGCGCACTGG GCCTTGGCAA CCCCGACCCG 
GCAGAGCCCG CGGGCCATGC CGACCTCGAC GCGACCTTTT CGTTCAACTG CACCCATGCG 
GCCGCGGCAA AGTTCATCGA CGTGAATCTG TTCTCCGCCT TCAAGGGCAC GCGCCAGATC 
GATTCGCAGA TTGCATCCGC GCAAGGCCAG TTCAAGCGCC AGCTCAAGCG CCCGGCCGGC 
GCACAGGCCG CCCAGCCCGT TCGCCTGAAC CTGGGCAAGT GA
 
Protein sequence
MSKTRLRRRI SSGFALAAAL FAAPFLSAQA QQQHAHVHGQ LKLDVAIDGP TVVIDMESPL 
DNIVGFERAP KTDAEKKTAE DAIAQLRAAD KLFAIDPAAN CKLGPVELRS SALGLGNPDP 
AEPAGHADLD ATFSFNCTHA AAAKFIDVNL FSAFKGTRQI DSQIASAQGQ FKRQLKRPAG 
AQAAQPVRLN LGK