| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_1564 |
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| Symbol | |
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| ID | 7974793 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 1691838 |
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| End bp | 1692587 |
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| Gene Length | 750 bp |
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| Protein Length | 249 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 644792164 |
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| Product | ABC transporter related |
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| Protein accession | YP_002943481 |
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| Protein GI | 239814571 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1136] ABC-type antimicrobial peptide transport system, ATPase component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAGCACCG TCCCCCAGGG CGAGGCCGCG CCGCCGCTGC GCGTGGTGCT CGCCGCCGAA
GGGTTGCGCT TCTCGTGGCC CGGCATGCCA AGGCCGTGCA TCGACATCGA GGCCTTGCGC
ATCACCGCGG GCGAGGCCGT CTTCCTGCAC GGGCCGAGCG GCTGCGGCAA GAGCACGCTG
CTGTCGCTTC TGGCCGGCGT GCTGGTGGCG GACGAAGGCC GCGTCACGCT GCTGGGGCAC
GACTGGTCGC AGCTCTCCGG CGCCGCGCGC GACCGCTCCC GCGTTGCGCA CGTCGGCTAC
ATCTTCCAGC AGTTCAACCT GCTGCCCTAC CTGAACGTGC TCGACAACGT GCTGCTGCCC
TGCCGCTTCT CGCAGCGGCG AGAGGCGCAG GCCGCACGCG GCGGCAGCGC GCGCGAAGAG
GCCGAGCACC TGCTCGATCA GATGGGACTC GACCGCAACC TCTGGAAGCG CCAGGCGATG
CAGCTCTCCG TGGGCCAGCA GCAGCGCGTG GCCGCGGCGC GCGCGCTCAT CGGCCAGCCC
GAAGTGGTGA TTGCCGACGA ACCCACCTCG GCGCTCGACG AGGACCGGCG CGAAGCCTTC
CTCGACGTGC TGCTGACGGC CTGCGCCGTG AACAACAGCG CGCTCGTGTT CGTGAGCCAC
GACCAGCGCA TTGCGCAGCG CTTTGCGCGG CACGTGCTGC TGCCCGAGAT CAACCGCGCG
GCGCCCGCGG CCATGGCGGC GGACAGCTGA
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| Protein sequence | MSTVPQGEAA PPLRVVLAAE GLRFSWPGMP RPCIDIEALR ITAGEAVFLH GPSGCGKSTL
LSLLAGVLVA DEGRVTLLGH DWSQLSGAAR DRSRVAHVGY IFQQFNLLPY LNVLDNVLLP
CRFSQRREAQ AARGGSAREE AEHLLDQMGL DRNLWKRQAM QLSVGQQQRV AAARALIGQP
EVVIADEPTS ALDEDRREAF LDVLLTACAV NNSALVFVSH DQRIAQRFAR HVLLPEINRA
APAAMAADS
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