Gene Vapar_1511 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVapar_1511 
Symbol 
ID7973109 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVariovorax paradoxus S110 
KingdomBacteria 
Replicon accessionNC_012791 
Strand+ 
Start bp1635053 
End bp1635580 
Gene Length528 bp 
Protein Length175 aa 
Translation table11 
GC content69% 
IMG OID644792109 
Producttranscriptional regulator, MarR family 
Protein accessionYP_002943428 
Protein GI239814518 
COG category[K] Transcription 
COG ID[COG1846] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGCAACG ACGCCTCGCA TGCTGCGCTC AGCGACGCCG AGGAGCTCGG CCACGAGGCC 
CGTGCCGGCC GCGAAGACCA CGCCATGCTC AGGCTGTGGC TGCGCATGCT CGCCAGCACC 
ACGCAGATCG AGGCCGAGAT CCGGCGCCGG CTGCGCGAGC GCTTCGGCAT CTCGCTGGCG 
CGCTTCGACT ACATGGCCCA GCTCTACCGC TATGAAGAGG GCCTCAAGAT GCGCGTGCTG 
TCGCGCTACC TGATGGTGAC GGGCGGCAAC GTCACGGGCC TGACCGACGA ACTCGAGCGC 
GACGGCCTGG TGGCGCGCGC CCACAGCCCC GACGACCGCC GCTCGTGGAT CGTGAGCCTC 
ACGCCCAAGG GGCGCGCGAG CTTCGAGACC ATGGCCAAGG AACACGAGCA ATGGATCCTC 
GAGATGTTCT CGGGCCTCGA CATGAAGACC GTCAGGCAGA TGCACGCTCA GCTCGGCCAG 
CTGCGCGTGC ACGTGATGCG CAGCGAGCCT GCGGGCGAGG AGGGCTGA
 
Protein sequence
MRNDASHAAL SDAEELGHEA RAGREDHAML RLWLRMLAST TQIEAEIRRR LRERFGISLA 
RFDYMAQLYR YEEGLKMRVL SRYLMVTGGN VTGLTDELER DGLVARAHSP DDRRSWIVSL 
TPKGRASFET MAKEHEQWIL EMFSGLDMKT VRQMHAQLGQ LRVHVMRSEP AGEEG