| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_1496 |
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| Symbol | |
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| ID | 7973094 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 1618341 |
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| End bp | 1619513 |
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| Gene Length | 1173 bp |
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| Protein Length | 390 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644792094 |
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| Product | hypothetical protein |
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| Protein accession | YP_002943413 |
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| Protein GI | 239814503 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0183] Acetyl-CoA acetyltransferase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.770654 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGGAAAC GACGGCTCTC CTACGAAGGC GTCGCGGTCG CGGTGCCCAT CACCGTGCCC
TATGTGCGCT ACTCCACGCG CACGGCGCAC TGGTTCATCG GGCAGGCCAT CGAGGCGCTG
GTCGAAGCCA GCGGCGTGGC CAAGGAACAG ATCGACGGCC TGTGCCTCAG CAGCTTCTCG
CTCGCGCCCG ACACGGCAGT GGGCGTCACG CAGCACCTGG GCCTTTCGCC GCGCTGGCTC
GACCATGTGC CCACGGGCGG TGCCTCGGGC GTGATGTGCC TGCGCCGCGC GGCGCGCGCC
GTGCAGGCGG GCGATGCCGA CATCGTGGCC TGCGTGGGGG CCGACACCAA CCACGTCGAC
TCCTTCCGCC AGACGCTGGG CAGCTTCAGC AACTTCGCAC GCGATGCGAG CTACCCCTAC
GGTTCGGGCG GACCCAACTC GATCTTCGCG TTCATCACGG CCAACTACAT GCGCACCTAC
GGCGCTCGGC GCGAAGACTT CGGCCGCATC TGCGTGGACC AGCGCACCAA TGCGCTCGGC
AATCCGAACG CGATGTTCAA GAAGCCGCTC ACGCTCGACG AGTACATGGC CGCGCGGCCC
ATCTCGGACC CGATCCACCT GTTCGACTGC GTGATGCCCT GCGCGGGTGC CGACGCCTTC
CTTGTGATGA GCGAGGAGCG TGCGCGCGAC CTCGGTCTTG CGCATGTGGT GATCCGCGGC
GCCATCGAGC GCCACAACGC CTATGCCGAC GATCCGGTGA TGGTGCAGGG CGGCTGGCGC
ATGGACCGCG ATGACCTCTA CGCGCAGGCT GGCGTGCAGC CCGCGGCGCT CGACTTCGTG
CAGACCTACG ACGACTACCC GGTCATCGTG ATGATGCAGT TCGAGGACCT GGGCTTCTGC
GAGAAGGGCG AGGGCGCGGC CTTCGTGCAG GCCAACACGA TGACCTTCGA CGGCAGCTTT
CCGAACAACA CGAGCGGCGG GCAGCTCTCG GCCGGGCAGG CCGGTGCCGC GGGCGGCTTT
CTCGGCATGG TCGAGGCGAT CCGCCAGTTG ACCGGCCAGG CCGGCCCTCG GGCGGTGCCC
GACGCGCAGC TGGGCCTCGT CGCCGGCTTC GGCATGGTGA CCTACGACCG CTGCCTCTGT
ACGGGCGCCG TCATTCTCGG GAGACCCGCA TGA
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| Protein sequence | MRKRRLSYEG VAVAVPITVP YVRYSTRTAH WFIGQAIEAL VEASGVAKEQ IDGLCLSSFS
LAPDTAVGVT QHLGLSPRWL DHVPTGGASG VMCLRRAARA VQAGDADIVA CVGADTNHVD
SFRQTLGSFS NFARDASYPY GSGGPNSIFA FITANYMRTY GARREDFGRI CVDQRTNALG
NPNAMFKKPL TLDEYMAARP ISDPIHLFDC VMPCAGADAF LVMSEERARD LGLAHVVIRG
AIERHNAYAD DPVMVQGGWR MDRDDLYAQA GVQPAALDFV QTYDDYPVIV MMQFEDLGFC
EKGEGAAFVQ ANTMTFDGSF PNNTSGGQLS AGQAGAAGGF LGMVEAIRQL TGQAGPRAVP
DAQLGLVAGF GMVTYDRCLC TGAVILGRPA
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