| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_1479 |
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| Symbol | |
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| ID | 7973077 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 1599038 |
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| End bp | 1600126 |
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| Gene Length | 1089 bp |
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| Protein Length | 362 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644792077 |
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| Product | histidinol-phosphate aminotransferase |
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| Protein accession | YP_002943396 |
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| Protein GI | 239814486 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0079] Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase |
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| TIGRFAM ID | [TIGR01141] histidinol-phosphate aminotransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.247325 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCATCC CCGCACCGGC CTTCTGGAGC CCGCGCATCG CCGCGCTCGA ACCCTACGTG
CCCGGCGAGC AGCCGCGCAT CGCCAACCTC GTCAAGCTCA ACACCAACGA GAACCCGTAT
CCGCCGTCAC CGCTCGCCAT CGACGCCATC CAGCAGGCCG CGGCAAACGG CCTGGAGCGC
TATCCGGACC CCACCTCGCT CGCGCTGCGC GAAGCCGTGG CGCGGCGGCA CGGCCTGCAG
GCCGGCCAGG TCTTTGCGGG CAACGGCTCG GACGAGGTGC TGGCGCATGC CTTCTTCGCC
TTCTTCCAGC AGGCCGAGCC GTTGCTGATG CCCGATGTGA GCTACAGCTT CTACCGGGTC
TATGCGCAGC TCTACGGCAT CGGCTGCGAA CTGCTGCCGG TCGACGAAGG CCTGCGCATC
GACGTCGATG CCATGGCGGC CCGCGCCCGC AGCGGCTGCG CGGGCCTGGT GATCGCCAAC
CCGAATGCGC CCACGGGCAT CGGGCTGCCG CTCGCGCGCA TCGAGCAACT GCTCGCAGCC
TGTCCCGAGC GCGTGGTGCT GGTCGATGAG GCGTATGTCG ATTTCGGCGG CGAGAGCGCG
CTGCCGCTCA TCGGCAAGTA TCCGAACCTG CTGGTGGTGC AGACCTTGTC CAAGTCGCGT
TCGCTGGCGG GCCTGCGGGT GGGCTTTGCC TGCGGGCAGG CGCATCTGGT CGACGCGCTG
GTGCGCGTCA AGGACAGCTT CAATTCCTAT CCGCTCGACC GGCTTGCCAC CGCCGGCGCG
GTGGCGGCGC TCGAAGACGA GGCCTGGTTC CAGACCACGC GCGACAAGGT CGTCGACACC
CGCGAAGGGC TCAGCCTGCA GCTCGAAGAC CTGGGCTTTG AAGTGCTGCC CTCGCAGGCC
AACTTCGTGT TCGCGCGCCA TCCGAAGCGC GATGCCGCCG AACTGGCGGC GCTGCTGCGC
GAGCGCGCGG TGCTGGTGCG GCATTTCAGG CAGCCGCGCA TTGCGCAGTA CCTGCGCATC
AGCATCGGCA CGCGCGAGCA GTGCGAGGCG CTGGTGCAGG CGCTCGAATC GATCCTGGGC
GTTCAGTAG
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| Protein sequence | MTIPAPAFWS PRIAALEPYV PGEQPRIANL VKLNTNENPY PPSPLAIDAI QQAAANGLER
YPDPTSLALR EAVARRHGLQ AGQVFAGNGS DEVLAHAFFA FFQQAEPLLM PDVSYSFYRV
YAQLYGIGCE LLPVDEGLRI DVDAMAARAR SGCAGLVIAN PNAPTGIGLP LARIEQLLAA
CPERVVLVDE AYVDFGGESA LPLIGKYPNL LVVQTLSKSR SLAGLRVGFA CGQAHLVDAL
VRVKDSFNSY PLDRLATAGA VAALEDEAWF QTTRDKVVDT REGLSLQLED LGFEVLPSQA
NFVFARHPKR DAAELAALLR ERAVLVRHFR QPRIAQYLRI SIGTREQCEA LVQALESILG
VQ
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