| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_1478 |
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| Symbol | |
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| ID | 7973076 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 1598023 |
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| End bp | 1599024 |
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| Gene Length | 1002 bp |
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| Protein Length | 333 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644792076 |
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| Product | cobalamin biosynthesis protein CbiB |
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| Protein accession | YP_002943395 |
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| Protein GI | 239814485 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG1270] Cobalamin biosynthesis protein CobD/CbiB |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCTTCT TTGCCATCCT GTGTGCGTTG CTGATCGAGC AGGTGAGGCC GCTCGCCTCC
CACAACCCGG TGTACGGCGG CGTGCTGGCC TGGACGCGCT GGACCAGCCG CAATTTCGAC
GCCGGCAAGC CGCACCACGG ATGGGTTGCA TGGGGCCTTG CAGTGCTCAT GCCCACGCTG
ATGACGCTGG GCATCCACCT GCTGCTGGTG TTCACGCTGG GGCTGCCGTT CGCGGTGCTC
TGGAGCATTG CGGTGCTCTA CGTCACGCTC GGCTTCCGGC AGTTCAGCCA CCACTTCACG
GACATCCGCG ACGCGCTCGA CGAGGGCGAC GAGCCGCTCG CGCGCTCGCT GCTGGCGCAC
TGGCAGGGCG TGGATGCGGC CGAACTGCCG CGCAGCGAAA TCGTCCGCCA TGTGATCGAG
CATTCGGTGA TTGCGGCGCA CCGCCACGTG TTCGGCGTGC TGGCCTGGTT CTCGGTGCTC
GCCGCCCTGG GCCTGGGGCC GGCCGGCGCG GTGTTCTACC GCATGAGCGA GTTCGTCTCG
CGCTACTGGC ACCACAAGAA TGGTGCGGCG GTGCAGCCCT CGAGCGTCTC GGTGCAGCGG
GCCGCGGAGA GCGCCTGGCA CGCGATCGAC TGGCTGCCCG CGCGCATCAC CGCACTGGGC
TTTGCCGTGG TCGGCAGCTT CGAAGAGGCG ATCGACTGCT GGCGCAATGA CGCGCGGCGC
TTTCCGAGCG AGAACGACGG CGTGATCCTC GCGGCGACCT CGGGCGCGGT CAACGTGCGC
CTGGGCGGCG GCGCGCTGAG TCCGATTCCC GTCACCGATC CGCTCCCGCG CGCGCAGGCC
GGCGATTCGA TGGCCGATGG CCGCCGGCTC GACAGCGGCA GCACGCCGGG CCGCGAGCCC
GAGCCCGGCC ACCTGCGCAG CGTGGTGGGC CTGGTGTGGC GCTCGGTGGT GATGTGGATG
GTGCTGCTGG CCCTGCTCAC GCTGGCCCGC CTGCTCGGCT GA
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| Protein sequence | MSFFAILCAL LIEQVRPLAS HNPVYGGVLA WTRWTSRNFD AGKPHHGWVA WGLAVLMPTL
MTLGIHLLLV FTLGLPFAVL WSIAVLYVTL GFRQFSHHFT DIRDALDEGD EPLARSLLAH
WQGVDAAELP RSEIVRHVIE HSVIAAHRHV FGVLAWFSVL AALGLGPAGA VFYRMSEFVS
RYWHHKNGAA VQPSSVSVQR AAESAWHAID WLPARITALG FAVVGSFEEA IDCWRNDARR
FPSENDGVIL AATSGAVNVR LGGGALSPIP VTDPLPRAQA GDSMADGRRL DSGSTPGREP
EPGHLRSVVG LVWRSVVMWM VLLALLTLAR LLG
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