| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_1467 |
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| Symbol | |
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| ID | 7973065 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 1589773 |
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| End bp | 1591413 |
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| Gene Length | 1641 bp |
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| Protein Length | 546 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 644792065 |
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| Product | poly(A) polymerase |
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| Protein accession | YP_002943384 |
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| Protein GI | 239814474 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0617] tRNA nucleotidyltransferase/poly(A) polymerase |
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| TIGRFAM ID | [TIGR01942] poly(A) polymerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATCAAGA AATTCATCGA CAAGCTGCTC GGCAAATCGG CCGACGGCGC ACAGGGCAAG
AGCCGCTTCG GCAAGCGCCA GGAGGTGCCG GCAGAGGTTC ACAAGATCGA TCCAGCCCTG
GTCGACGAAC GTGCCAGGAA CGTCGTCACC ACGCTCCAGC AGGCCGGCTA CGAGGCCTAC
GTGGTGGGCG GCGCGGTGCG CGACCTGCTG CTGGGGCTGC GCCCCAAGGA CTTCGACGTG
GCCACCAACG CCACGCCCGA GCAGGTCAAG TCGCTCTTCC GGCGTGCCTT CATCATCGGG
CGGCGCTTTC GCATCGTGCA CGTGGTGTAC GGCCGCGGCC GCGAGCACGA GGTGATCGAG
GTCTCGACCT TCCGCGCCTA CATGGACAAC GCCGCCGCCG AGCAGGTGGC CGGCAACGAG
CGCACCAGCA AGGGCGAGCT CGCGAGCATG AAGCATGCGG TGGACGCCAG CGGCCGCGTG
CTGCGCGACA ACGTCTGGGG CCCGCAGGAG GAAGACGCGG CGCGCCGCGA CTTCACCGTG
AACGCCATGT ACTACGACCC CGCCAACCAG GTCGTGGTCG ACTACCACAA CGGCATCCGC
GACGCCCAGA AGCTCACGCT GCGCATGATC GGCGACCCGG CCACGCGCTA CCGCGAAGAC
CCGGTACGCA TCATCCGCGC CATCCGCTTC TCGGCCAAGC TCGCGGCGCT GGGCTTCAAG
ATGGAAGCCA AGACGGCCGC GCCGCTGGTC GAGTCGAGCA AGCTGCTGGC CGACGTGCCG
CAGAGCCGCC TGTTCGACGA AATGCTCAAG CTGCTGCAGA CCGGCCATGC CATTGCCACG
GTCGAGCAAC TGCGCAAGCT GGGCCTCGCC AAGGGCATCT ATCCGCTGCT CGACGTGGTG
GTGGAGCGGG CCGACCAGCC CTTCGTGAAG GCGGCGCTGC AGGACACCGA CCGCCGCGTC
GGCGAAGGCA AGCCCGTGGC GCCGAGCTTC CTTCTGGCCT GCGTGCTGTG GGCCGACGTG
CGCGACGGCT GGGCCCAGCG CGTCGAGGGC CAGCGCGGCC AGCGTCCGCA GCCGCCGTTC
CCGGCGCTGC AGGACGCGAT CGACGACGTG TTCAACGCCC GCATCGGCGA TGTGTCGGGC
CGCGGCAAGC TCGCTGCCGA CATGCGCGAG ATCTGGATGA TGCAGCCGCG CTTCGACAAG
CGCACCGGCT CCACGCCCTA CAGCCTGGTC GACCAGGCGC GGTTCCGCGC CGCCTTCGAC
TTCATGCGGC TGCGCGCCGA CGTGGGCGAG GTCAGCGAGG CCATCGCCGA GTGGTGGCAG
GAGTTCAGCA CCGCCGACGA CGTGCGCCAG CAAGACCTGC TGGAGCAGGT GCGCGACGAG
CAAAAGACCC GCCAGCGCGT GCGAACGCGC GACCCGGTCG CGCCCAAGCC CTCCCGCGGC
GAACCGGCGG CGCGCCAGCG CCAGCCCGAT GCCGACGCGC GGCAGGGCGA CGAGGCCGAG
GAAGTCGAGG TCGAGGCCGG CGCCGTGCCG CCCGATGGCG AGCCGGCTGC GCCGCGCAAG
CGCCGCCGTC GCCGCAAGCC GCGCACCGGC GGTGGTGGTG AGGGCGGCGG CGAGGGCGGC
GGGAGCGCCG CAGCCGAATG A
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| Protein sequence | MIKKFIDKLL GKSADGAQGK SRFGKRQEVP AEVHKIDPAL VDERARNVVT TLQQAGYEAY
VVGGAVRDLL LGLRPKDFDV ATNATPEQVK SLFRRAFIIG RRFRIVHVVY GRGREHEVIE
VSTFRAYMDN AAAEQVAGNE RTSKGELASM KHAVDASGRV LRDNVWGPQE EDAARRDFTV
NAMYYDPANQ VVVDYHNGIR DAQKLTLRMI GDPATRYRED PVRIIRAIRF SAKLAALGFK
MEAKTAAPLV ESSKLLADVP QSRLFDEMLK LLQTGHAIAT VEQLRKLGLA KGIYPLLDVV
VERADQPFVK AALQDTDRRV GEGKPVAPSF LLACVLWADV RDGWAQRVEG QRGQRPQPPF
PALQDAIDDV FNARIGDVSG RGKLAADMRE IWMMQPRFDK RTGSTPYSLV DQARFRAAFD
FMRLRADVGE VSEAIAEWWQ EFSTADDVRQ QDLLEQVRDE QKTRQRVRTR DPVAPKPSRG
EPAARQRQPD ADARQGDEAE EVEVEAGAVP PDGEPAAPRK RRRRRKPRTG GGGEGGGEGG
GSAAAE
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