Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Vapar_1452 |
Symbol | |
ID | 7971280 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Variovorax paradoxus S110 |
Kingdom | Bacteria |
Replicon accession | NC_012791 |
Strand | - |
Start bp | 1577005 |
End bp | 1578213 |
Gene Length | 1209 bp |
Protein Length | 402 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 644792050 |
Product | acetylornithine aminotransferase |
Protein accession | YP_002943369 |
Protein GI | 239814459 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG4992] Ornithine/acetylornithine aminotransferase |
TIGRFAM ID | [TIGR00707] acetylornithine and succinylornithine aminotransferases |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCGCTA CCGCCCAGCC CACCTCGCCC CACGTCATGA ACACCTACGG TCGCCTGCCG ATCGCGCTGT CGCACGGCCA GGGCTGCCGA GTCTGGGACA CCGCGGGCAA GGCCTACCTC GACGGCCTCG GCGGCATTGC CGTGAACACG CTGGGCCACA ACCACCCCGA GCTGGTGCCC GCGCTGCAGG ACCAGATCAG CAAGCTGATC CACAGCTCCA ACTACTACCA CGTGCCCGGC CAGGAACAGC TGGCCGCCAA GCTGACCGAG CTCTCGGGCC TGACCAACGC CTTCTTCTGC TGCACCGGCC TGGAAGCCAA CGAGGCCGCC CTGAAGCTCG CGCGCAAGTT CGGCCACGAC AAGGGCATCG AGCGGCCCGA GATCGTGGTG TACGAAGCCG CTTTCCACGG CCGCAGCATC GCCACCCTGT CGGCCACCGG CAACCCGAAG GTGCAGGCCG GCTTCGGCCC GCTGGTCGAG GGCTTCATCC GCGTGCCGCT GAACGACATC GAGGCCCTGA AGAAAGCCAC CGAAGGCAAC CCCAACGTGG TCGCCGTGTT CTTCGAGACC ATCCAGGGCG AAGGCGGCAT CAACCCGATG CGCTGGGAGT ACCTCAAGCA GGTGCGTGCC CTGTGCGACC AGCGCGACTG GCTCATGATG ATCGACGAAG TGCAATGCGG CATGGGCCGC ACCGGCAAGT GGTTTGCGCA CCAGTGGGCC GGCATCAAGC CCGACGTGAT GCCGCTGGCC AAGGGCCTGG GCTCGGGCGT GCCGATCGGC GCCGTGGTGG CCGGTCCCAA GGCCGCCCAC ATCTTCGGCC CCGGCAACCA TGGCACCACC TTCGGCGGCA ATCCGCTTGC GATGCGCGCC GGCATCGAGA CCATCCGCAT CATGGAAGAG CACAAGCTGC TCGAGAACGC CGCCGCCGTG GGCGAGCACC TGAAGGCCGC GCTGGAACGC GAGATCGGCG GCCTGACCGG CGTGAAGGAA ATCCGCGGCC AGGGCCTGAT GCTGGGCATC GAGCTCGACC GGCCCTGCGG CGTCATCCTG AACCGCGCCT GCGACGCCGG CCTGCTGCTG AGCGTGACGG CCGACAAGGT GATCCGCCTG GTGCCGCCGC TCATCCTGAG CATTGCCGAG GCCGACGAGA TCGTCGCGAT CCTCGCGCCC CTCGTCAAAA CATTCCTGTC GGAGCCCGCA GCGCAATGA
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Protein sequence | MSATAQPTSP HVMNTYGRLP IALSHGQGCR VWDTAGKAYL DGLGGIAVNT LGHNHPELVP ALQDQISKLI HSSNYYHVPG QEQLAAKLTE LSGLTNAFFC CTGLEANEAA LKLARKFGHD KGIERPEIVV YEAAFHGRSI ATLSATGNPK VQAGFGPLVE GFIRVPLNDI EALKKATEGN PNVVAVFFET IQGEGGINPM RWEYLKQVRA LCDQRDWLMM IDEVQCGMGR TGKWFAHQWA GIKPDVMPLA KGLGSGVPIG AVVAGPKAAH IFGPGNHGTT FGGNPLAMRA GIETIRIMEE HKLLENAAAV GEHLKAALER EIGGLTGVKE IRGQGLMLGI ELDRPCGVIL NRACDAGLLL SVTADKVIRL VPPLILSIAE ADEIVAILAP LVKTFLSEPA AQ
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