| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_1447 |
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| Symbol | |
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| ID | 7971275 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 1572872 |
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| End bp | 1573720 |
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| Gene Length | 849 bp |
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| Protein Length | 282 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 644792045 |
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| Product | tryptophan 2,3-dioxygenase |
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| Protein accession | YP_002943364 |
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| Protein GI | 239814454 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG3483] Tryptophan 2,3-dioxygenase (vermilion) |
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| TIGRFAM ID | [TIGR03036] tryptophan 2,3-dioxygenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.248463 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCACCG AAAAGAGCAC CGAGAAGATC GTCCACGAGG AAAAGGCGCA GCTGGATTTC
AGCGCGTCGA TGAGCTATGG CGACTACCTG CACCTGGACG AGATCCTCAA CGCGCAGCAT
CCGCTGTCGC CCGCGCACGA CGAGATGCTG TTCATCGTGC AGCACCAGAC CAGCGAACTC
TGGATGAAGC TGATGCTGCA CGAACTGCGC GCCGCCACCA GCTGCATCGC CGAAGAGAAG
CTGGCCGACG CCTTCAAGAT GCTCGCGCGG GTGAGCCGCA TCATGGAGCA GCTGGTGAGC
GCATGGACCG TGCTCTCGAC CATGACGCCG CCCGAGTACA CGGCGATGCG GCCCTACCTC
GCCAACTCCA GCGGCTTCCA GAGCGCGCAG TACCGCTGCA TCGAGTTTGC GCTCGGCAAC
AAGAACGCCG CCATGCTCAA GCCGCATGCG CACCGGCCCG ACCTGCTCGC GCAGGTGGAT
GCGGCCTACC GCTCGCCATC GCTCTACGAC GAGTCGCTGA AGCTGCTCGC ACGGCACGGC
CTGCCGGTGC CCGCCGATCA CCTGGAGCGC GACTGGACCC AGCCCTACCA GGCCAGCGAC
GGCGTGGAAG CGGCCTGGCT CACGGTGTAC CGCAACCCGC ACGACCATTG GGACCTGTAC
CAGCTCGGCG AAAAACTCAC CGACCTGGAA GACGCCTTCC GCCTCTGGCG CTTTCGCCAC
GTGACCACGG TGGAGCGCGT GATCGGCTTC AAGCGCGGCA CGGGCGGAAC GGGCGGCGTG
AGCTACCTGC GCAAGATGCT CGACGTGGTG CTGTTCCCCG AAATCTGGAA GCTGCGCACC
GATCTGTGA
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| Protein sequence | MSTEKSTEKI VHEEKAQLDF SASMSYGDYL HLDEILNAQH PLSPAHDEML FIVQHQTSEL
WMKLMLHELR AATSCIAEEK LADAFKMLAR VSRIMEQLVS AWTVLSTMTP PEYTAMRPYL
ANSSGFQSAQ YRCIEFALGN KNAAMLKPHA HRPDLLAQVD AAYRSPSLYD ESLKLLARHG
LPVPADHLER DWTQPYQASD GVEAAWLTVY RNPHDHWDLY QLGEKLTDLE DAFRLWRFRH
VTTVERVIGF KRGTGGTGGV SYLRKMLDVV LFPEIWKLRT DL
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