Gene Vapar_1443 details

Gene Information

• Locus tag: Vapar_1443
• ID: 7971271
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Variovorax paradoxus S110
• Kingdom: Bacteria
• Replicon accession: NC_012791
• Strand: +
• Start bp: 1568080
• End bp: 1569975
• Gene Length: 1896 bp
• Protein Length: 631 aa
• Translation table: 11
• GC content: 69%
• IMG OID: 644792041
• Product: ferrous iron transport protein B
• Protein accession: YP_002943360
• Protein GI: 239814450
• COG category: [P] Inorganic ion transport and metabolism
• COG ID: [COG0370] Fe2+ transport system protein B
• TIGRFAM ID: [TIGR00231] small GTP-binding protein domain; [TIGR00437] ferrous iron transporter FeoB

Plasmid Coverage information

• Num covering plasmid clones: 7
• Plasmid unclonability p-value: 0.0983772
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGTTGAGG CCGTCATCCA GGGACCGGGG CGCCTTGCGG CCACGGCGCA GCCTGCGCGC 
ATCGCGTTGT TGGGCAATCC GAACTGCGGC AAGACGGCGC TGTTCAACCT GCTCACCGGC 
AGCCGCCAGA AGGTGGCCAA CTATGCCGGC GTGACGGTCG AGCGCAAGGA AGGGTCGCTG 
CGCACCGCGT CGGGCCGGCG CGTGTTCGTG CTCGACCTGC CGGGCGCCTA CAGCCTCAAC 
GCGCTCAGCG TGGACGAGGC CGTGACGCGC GACGTGGTCA CGGGCAAGAG CAGCGAGCCC 
CTGCCCGACC TGCTGGTGTG CGTGACCGAT GCCACCAACC TGCGGCTCAA CCTGCGGCTC 
GTGCTCGAGG CCAAGCGCCT GGGTCTGCCG ATGGTGGTGG CGCTCAACAT GACCGACATG 
GCCAGGAAGC AGGGCATCGC GGTCGACACG GCCGTGCTGT CGCGCGAACT GGGCGTGCCG 
GTCATCGAGA CCGTGGGCGT GCAGTCGGGC GGCGCGCAGG GCCTGCTCGA AGCCCTCGAT 
GCACCCGTGG CCGCCGCGGC GCCGCTGCCC TGGCAGGCGC CGGGGCTGGA CGACGTGCTG 
GCCACGCAGC GCGAAGTGCG CCGCATCCTC GGCCTGGCCG TGCACGAGCC GGTCGGCAGC 
CTGGCCACCA GCGACCGCAT CGATCGCGTG GTGATGCACC CGGTGTGGGG CCTGCTGGTG 
CTCGCGGTCA CGATGTTCCT GATGTTCCAG GCCGTGTTCA GCTGGGCCAA CGTGCCCATG 
GACGCCATCA AGGCCGGCAC CGAGGGCCTG GGCAACCTGC TGAAGGCCCA CATGCCCGAA 
GGCATGCTGC AGAGCTTGCT GGTCGATGGC GTGATTGCCG GCGTGGGCGG CGTGATCGTG 
TTCCTGCCGC AGATCCTGAT CCTGTTCCTG TTCATCCTGG CGCTCGAAGA CTCGGGCTAC 
CTGCCGCGCG CGGCCTTCCT GCTGGACCGC GTGATGGGCA CGGTGGGCCT GTCGGGCCGC 
TCCTTCATTC CGCTGCTGTC GAGCTTTGCC TGCGCCATTC CCGGCGTGAT GGCCACGCGC 
ACCATCAGCA ACTGGCGCGA CCGCATCACC ACCATCATGA TTGCGCCGCT CATGACCTGC 
TCGGCGCGCC TGCCGGTCTA TGCGCTGCTG ATCGCGGCCT TCATTCCCGC GCGCACCGTG 
GGCGGCGTGT TCAACCTGCA GGGCGTGGTG CTGTTCGCGC TGTATGTCTT CGGCATCGTG 
TCGGCCATGG CGGTGGCCTG GGTGATGAAG CGCTTCCGCG ACAGCAAGCA GCATTCGCCG 
CTGATGATGG AGCTGCCGGC CTACCGCTGG CCCAATGTGC GCAACCTGGC GCTCGGGCTC 
TACGAGCGGG CCTGGATCTT CATCCAGCGC GTGGGCACGA TCATCCTCAC GCTCACGATC 
CTGCTGTGGT TCCTGTCGAC CTTCCCGTCG CCGCCCGAAG GCGCCACGGG CCCGGCCATC 
CAGTACAGCC TGGCGGGCAT GATCGGCCGC GGCCTGGAGC ACATCTTCGC GCCCATCGGC 
TTCAACTGGC AGATCTCCAT CGCGCTGGTG CCGGGCATGG CGGCGCGCGA AGTGGCGGTA 
GGCGCGCTCG GCACGGTGTA TGCGCTCTCG GCCAGCGGCG ACGACGTGGC CGGCCAGCTC 
GAGCCGCTGA TCGCGGGCAG CTGGTCGCTC GCAACGGCGC TGTCGCTGCT GGTCTGGTAT 
GTGTTTGCGC CGCAGTGCAT TTCCACGCTC GCGGCGGTCA AGCGCGAAAC CGGCTCATGG 
AAGTACGTCT GGATCATGGC CGGCTACCTG TTCGCGCTGG CCTACATGGC GTGCTTCATC 
ACCTACCGCG TGGCGCTGGC GCTGGGCGCG GGATGA 

 

Protein sequence

MVEAVIQGPG RLAATAQPAR IALLGNPNCG KTALFNLLTG SRQKVANYAG VTVERKEGSL 
RTASGRRVFV LDLPGAYSLN ALSVDEAVTR DVVTGKSSEP LPDLLVCVTD ATNLRLNLRL 
VLEAKRLGLP MVVALNMTDM ARKQGIAVDT AVLSRELGVP VIETVGVQSG GAQGLLEALD 
APVAAAAPLP WQAPGLDDVL ATQREVRRIL GLAVHEPVGS LATSDRIDRV VMHPVWGLLV 
LAVTMFLMFQ AVFSWANVPM DAIKAGTEGL GNLLKAHMPE GMLQSLLVDG VIAGVGGVIV 
FLPQILILFL FILALEDSGY LPRAAFLLDR VMGTVGLSGR SFIPLLSSFA CAIPGVMATR 
TISNWRDRIT TIMIAPLMTC SARLPVYALL IAAFIPARTV GGVFNLQGVV LFALYVFGIV 
SAMAVAWVMK RFRDSKQHSP LMMELPAYRW PNVRNLALGL YERAWIFIQR VGTIILTLTI 
LLWFLSTFPS PPEGATGPAI QYSLAGMIGR GLEHIFAPIG FNWQISIALV PGMAAREVAV 
GALGTVYALS ASGDDVAGQL EPLIAGSWSL ATALSLLVWY VFAPQCISTL AAVKRETGSW 
KYVWIMAGYL FALAYMACFI TYRVALALGA G