| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_1423 |
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| Symbol | |
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| ID | 7971251 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 1546744 |
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| End bp | 1547691 |
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| Gene Length | 948 bp |
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| Protein Length | 315 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644792021 |
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| Product | transcriptional regulator, LysR family |
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| Protein accession | YP_002943340 |
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| Protein GI | 239814430 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCACTT CCGAACGCAA TTTCGCCCGC CGCATCGACC TCACGTCGCT GCAGCTGTTC
GTGGCCGTTT GCGAACTCGG CAGCATCGGG CGCGCCGCGG AGCGTGAATT CATTGCCGCC
TCGGCCATCA GCAAGCGGCT GTCGGACCTG GAAGCCACGC TGGGCACCAC CCTGCTCTAC
CGCCATGCGC GCGGCGTCGA TCTTTCCCCC GCGGGCGAAA GCCTGCTGCA CCATGCGCGC
TCGGTGCTCT ACAGCCTCGA GAAGATGCAG GGCGAGCTCA GCGAATACGC CGAGGGCGTG
CGCGGCCATG TGCGCGTGCA TGCCAACATC TCGGCCATCG TGCAGTTCCT GCCGGAAGAC
CTCGGCGCTT TCACGCGCGA GCACGATGCG ATCAAGATCG ACCTCGAAGA GCACCTGAGC
AACGAAGTGG TGCGCGCGGT CCAGGAAGGC GCGGCCGACC TCGGCATCTG CCACATACCC
GACGGCACGA ACGAGCTGCA GACCCTGCCC TACCGCCACG ACCGGCTGGT GCTGATCGCG
CCCGCCGGGC ATCCGCTCAC GGCAACGCAG GGGCCGATCG ACTTTGCCGC CTCGCTCGAT
TTCGACCACG TCGGCCTGCA CACCAACAGC TCGATCTACG TGGCCATGCA CCAGGCCGCG
CTCGAGGCCG GCCGCAGCGT GAAGCTGCGC ATCCACGTGA CCGGGCTGGA CGCCATGTGC
CGCATGATCG ACAACGGCCT GGGCGTCGGC GTGATGCCGC AGCGCGCCTT CGAGCTGCTG
CAGGCGGGCA TCGGCAGCCG CCTTCGCAGC GTGGCGCTCA ACGACGCCTG GTCCCGGCGC
GAGATCCGCC TGGCGGCGCG CGACTTCTCC ACCCTGCCGG TGGCCGCGCG CACGCTGGTC
AACCACCTGC ACACGCCGGC GGCGGCCGCC GAGCCGCTCG CCGCCTAG
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| Protein sequence | MSTSERNFAR RIDLTSLQLF VAVCELGSIG RAAEREFIAA SAISKRLSDL EATLGTTLLY
RHARGVDLSP AGESLLHHAR SVLYSLEKMQ GELSEYAEGV RGHVRVHANI SAIVQFLPED
LGAFTREHDA IKIDLEEHLS NEVVRAVQEG AADLGICHIP DGTNELQTLP YRHDRLVLIA
PAGHPLTATQ GPIDFAASLD FDHVGLHTNS SIYVAMHQAA LEAGRSVKLR IHVTGLDAMC
RMIDNGLGVG VMPQRAFELL QAGIGSRLRS VALNDAWSRR EIRLAARDFS TLPVAARTLV
NHLHTPAAAA EPLAA
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