| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_1370 |
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| Symbol | |
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| ID | 7973051 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 1490715 |
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| End bp | 1491656 |
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| Gene Length | 942 bp |
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| Protein Length | 313 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644791968 |
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| Product | transcriptional regulator, LysR family |
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| Protein accession | YP_002943287 |
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| Protein GI | 239814377 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.173382 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAAGGCA TAAGAAATAC TTTGGACAAG ATGCTCAACC TCGACCAGCT CCGGTCCTTC
GGCTTGGTGA TCGAAACCGG CAGCTTCTCG GCTGCGGCCG ACCGGCTCGG CCTCACGCAG
CCCGCGGTGA GCCTGCAGAT CCGCCAGCTG GAGCGCAGGC TCGCGGTGCG GCTGGTCGAG
CGCGTCGGCA AGCGCGCCAA GGCCACGCCG GCCGGTGCCG AGCTGCTGCG GCATAGCCAC
CACATCGAAA CAGCGGTGGA GAACGCCATC GACGCGCTGG CGGACCATGC GAGCGGTATC
ACGGGCCGCG TGCGGCTGGG CACCGGCGCC ACCGCCTGCC TGTATTTTTT GCCGGCCGTG
CTGCGCAGCC TGCGCGAGCA GTTTCCGGCG CTCGGCATCG TGGTAAGCAC CGGCAACACC
GACGACCATG TCCGCAAGGT GGAAGAGAAC AGCAGCGACC TTGCGCTGGT GACGCTGCCA
GCCGCGGGCC GGTCACTGAG CGTGGTGCCG GTGCTCGACG ACGAGTTCGT CGCCATCGGC
CGCAGCGACC TTGCGCCGCT GAAGGCGCGC GTAGCGCCCG CCGACCTGGC CGCGCTGCCG
CTGGTGCTGT TCGAGCCCGC GGCCAACACG CGCAAGCTGG TCGACCGCTG GTTCGCGGAC
GAAGGCCTGC AGCCGCAGCC CGTCATGGAA CTGGGCAGCG TCGAGGCGAT GAAGGAAATG
GTGGCCGCGG GGCTGGGCTA CGGCATCGTC CCGCGCATGG CAATGACGGG CCGCGGCGCG
CACCCGGGCC TGAAGATCAG CCGGCTGGCC CCCCGCATGC ACCGCACGCT GGCCGTGGTG
ATCCGGCGCG ACAAGCCGGT CAACAAGGCC CTGCGCGTGG TGCTCGATGC GATCCTTGCG
GCGGGCGCAC AGGCCGGCCG CGCTACTCGG CCGAAGAAGT AG
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| Protein sequence | MQGIRNTLDK MLNLDQLRSF GLVIETGSFS AAADRLGLTQ PAVSLQIRQL ERRLAVRLVE
RVGKRAKATP AGAELLRHSH HIETAVENAI DALADHASGI TGRVRLGTGA TACLYFLPAV
LRSLREQFPA LGIVVSTGNT DDHVRKVEEN SSDLALVTLP AAGRSLSVVP VLDDEFVAIG
RSDLAPLKAR VAPADLAALP LVLFEPAANT RKLVDRWFAD EGLQPQPVME LGSVEAMKEM
VAAGLGYGIV PRMAMTGRGA HPGLKISRLA PRMHRTLAVV IRRDKPVNKA LRVVLDAILA
AGAQAGRATR PKK
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