| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_1366 |
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| Symbol | |
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| ID | 7973047 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 1486697 |
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| End bp | 1487455 |
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| Gene Length | 759 bp |
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| Protein Length | 252 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 644791964 |
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| Product | hypothetical protein |
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| Protein accession | YP_002943283 |
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| Protein GI | 239814373 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG5266] ABC-type Co2+ transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.336133 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCCATGG CATTTCTTCT TCACAACCCC ATGCTGCGCG GCGCCGTCGC GGCTTCGCTG
CTGTGGGCCG TGTCGGCGGC GGCCCAGGCC CACGGCATCT GGTTTGCCCA GCGCTCGGGC
GACCTGGCCC TGATCTACGG CGAGGGCGGC GACGACCTCG ACGCCGCCAA GCGCCTGCCG
CTCATCAAGG CGGTGGCCGG CTACGACGCG GCGGGCCGCC CGGTGCAGAC CGCGCTCGAA
GCGGCCGGCA AGCTCGCGCT GGTCGACCTG CGCGAGCAGC CCGCCATCGT CGCTGCCGTG
CTGGACAACG GCATCTGGAC CAAGGCAGCC AACGGGCAGT GGTTCAAGAA GCCCAGGGGC
GAGGTGCCGG GCGCATCGGC CAGCGGCCAC AACTTCAAAT ACGCGGTGCA TCTGCGCGCG
CCGCTGGGCC GGCCGCTTGG AGGGCTGCCT GGCCATGCGC TGCAGATCGT GCCGGTCGAT
GCCGCGCTGC CCGCGATGCG CGGCGAACCG CTGCGCCTGC GCGTGCTCTA CCGCGGCGAG
CCCGCTGCCG GCGTGCCGGT GCTGGCCGAC TTCGTCAACG ACCCCGATGG CGAAACGGCC
CTGACCGGCG CCGACGGCAC GGTCACGCTG CCGGTGCGCA ACCAGGGACT CAACGTGATC
GCCGCCAGGC TCGATGCGCC CGCGGACGAT CCCGCCGCCA CCGACAAGGT CGAGCACCTG
GCCACGCTGT CGTTCCGGCT CGCGCATGCG CCGGAATGA
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| Protein sequence | MAMAFLLHNP MLRGAVAASL LWAVSAAAQA HGIWFAQRSG DLALIYGEGG DDLDAAKRLP
LIKAVAGYDA AGRPVQTALE AAGKLALVDL REQPAIVAAV LDNGIWTKAA NGQWFKKPRG
EVPGASASGH NFKYAVHLRA PLGRPLGGLP GHALQIVPVD AALPAMRGEP LRLRVLYRGE
PAAGVPVLAD FVNDPDGETA LTGADGTVTL PVRNQGLNVI AARLDAPADD PAATDKVEHL
ATLSFRLAHA PE
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