| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_1297 |
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| Symbol | |
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| ID | 7973222 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 1412819 |
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| End bp | 1413397 |
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| Gene Length | 579 bp |
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| Protein Length | 192 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644791895 |
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| Product | NUDIX hydrolase |
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| Protein accession | YP_002943214 |
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| Protein GI | 239814304 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG2816] NTP pyrophosphohydrolases containing a Zn-finger, probably nucleic-acid-binding |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCCCATC CCAAGTTCTG CCAGGCCTGC GCCACCCCGC TCGAATGGAT CGCCCTGATG
GAAGACGGCG GTCCCAAGGA GCGCCTGCGC TGCCCCTCCT GCGGCCACAC GCACTGGAAC
AACCCCACGC CCGTGCTCGC GGCCATCGTC GAGTACCGCG GCCAGGTGCT GCTGGCGCGA
AACGCCGCCT GGCCGGTGAA GATGTATGCG CTGATCACCG GCTTCATGGA AGCCGGCGAA
ACGCCCGAGG AAGGCATTGC GCGCGAGGTC AAGGAAGAAA CCAACCTCGA CGTGAGCGCG
ACCCAACTCG TCGGCGCGTA CGACTTCCAG CGCATGAACC AGATCATCAT CGCCTACCAC
GTGGTGGCCG ATGGCGAGGT CAAGCTTTCG CCCGAGCTGC TGGACTACCG CCTCTACGAC
CTGCCCGACC TCAAGTGCTG GCCCGCGGGC ACCGGCTATG CACTAGCCGA CTGGCTGCGC
ACGCGGGGGC ACGAGCCGGT GTTCTTTACC GCGGCGGAAA ACGAGGAACG GCGGCGCGGC
CTGAACCTGC CGCCCGAGGA GCCGAAGCAT GCAGGTTGA
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| Protein sequence | MAHPKFCQAC ATPLEWIALM EDGGPKERLR CPSCGHTHWN NPTPVLAAIV EYRGQVLLAR
NAAWPVKMYA LITGFMEAGE TPEEGIAREV KEETNLDVSA TQLVGAYDFQ RMNQIIIAYH
VVADGEVKLS PELLDYRLYD LPDLKCWPAG TGYALADWLR TRGHEPVFFT AAENEERRRG
LNLPPEEPKH AG
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