| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_1289 |
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| Symbol | |
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| ID | 7973213 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 1405232 |
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| End bp | 1406431 |
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| Gene Length | 1200 bp |
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| Protein Length | 399 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 644791886 |
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| Product | inner-membrane translocator |
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| Protein accession | YP_002943206 |
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| Protein GI | 239814296 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4177] ABC-type branched-chain amino acid transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGAACA GCAAGAACCT CGCGCTCTAC ATCCTGGGCG TCGTCGCGGT GCTCGCACTG
CCGATCTTCC TGCAAAGCCA GGGCAACGCC TGGGTGCGCA TCGCCGACAT CGCATTGCTC
TACGTGATGC TCTCGCTCGG CCTGAACATC GTCGTCGGCT ATGCCGGCCT GCTCGACCTG
GGCTATGTGG CCTTCTTTGC GATCGGGGCC TACCTGTTCG CGCTGATGGG CTCGTCGCAC
CTGTCCGACA CCTTTCCGTG GTTCAAGGCC ATGTTCCCGA ACGGGCTGCA CACCTCGCTG
CTCATCGTGA TACCGCTGGC GCTCGTGGTG GCCGGCATGC TGGGCGTGCT GCTCGGTGCG
CCCACGCTCA AGCTGCGCGG CGACTACCTG GCCATCGTGA CGCTCGGCTT CGGCGAGATC
ATCCGGGTGT TCCTGAACAA CCTCGACCAG CCGATCAACA TCACCAACGG ACCCAAGGGC
ATCACCGCCA TCGACTCCGT CAAGTTCTGG GGGCTCGACC TCGGCAAGGC GTGGAAGCTC
GACGGCTTCT CGATCTCCTC GGTCACGCTC TACTACTACC TGTTCCTTGC GCTGGTGGTG
GCCACGATCA TCATCTCGCA CCGCCTGCAG ATGTCGCGCA TCGGGCGCGC CTGGATGGCG
ATCCGCGAAG ACGAGATCGC CGCCAAGGCC ATGGGCATCA ATACCCGCAA CATGAAGCTG
CTGGCCTTCG GCATGGGCGC GAGCTTCGGC GGCGTGTCGG GCGCCATGTT CGCGGCCTTC
CAGGGTTTTG TCTCGCCGGA GTCGTTCAGC CTCATGGAGT CGGTGATGAT CGTTGCCATG
GTGGTGCTGG GCGGCATCGG CCACCTGCCG GGCGTGATCC TCGGCGCCGT GCTGCTGGCT
GCGCTGCCCG AGGTGCTGCG CTACGTGGCC GGCCCGCTGC AGGCCATGAC CGACGGCCGC
CTCGACGCGT CCATCCTGCG CCAGCTCTTC ATTGCGCTGG CCATGATCAT CATCATGCTG
GTGCGCCCGC GCGGCCTCTG GCCTTCGCCC GAGCACGGCA AGACATTGCA GCGCAAGGGG
GCCGCTGCCC CCGGCGCACC GGTGGCGCCG GGGTCGCTGC AGACCCATGC GCCGGGCATC
GAGACGCCGG CCGACGAACT GCCGGGTGCG GCCTCGCGCC CCATGTCGAT CAATCCGTGA
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| Protein sequence | MKNSKNLALY ILGVVAVLAL PIFLQSQGNA WVRIADIALL YVMLSLGLNI VVGYAGLLDL
GYVAFFAIGA YLFALMGSSH LSDTFPWFKA MFPNGLHTSL LIVIPLALVV AGMLGVLLGA
PTLKLRGDYL AIVTLGFGEI IRVFLNNLDQ PINITNGPKG ITAIDSVKFW GLDLGKAWKL
DGFSISSVTL YYYLFLALVV ATIIISHRLQ MSRIGRAWMA IREDEIAAKA MGINTRNMKL
LAFGMGASFG GVSGAMFAAF QGFVSPESFS LMESVMIVAM VVLGGIGHLP GVILGAVLLA
ALPEVLRYVA GPLQAMTDGR LDASILRQLF IALAMIIIML VRPRGLWPSP EHGKTLQRKG
AAAPGAPVAP GSLQTHAPGI ETPADELPGA ASRPMSINP
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