| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_1287 |
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| Symbol | |
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| ID | 7973211 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 1402757 |
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| End bp | 1404049 |
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| Gene Length | 1293 bp |
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| Protein Length | 430 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644791884 |
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| Product | recombination factor protein RarA |
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| Protein accession | YP_002943204 |
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| Protein GI | 239814294 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG2256] ATPase related to the helicase subunit of the Holliday junction resolvase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGGCCACCA GTTCGCATCA ACCCCTTGCC GAGCGCCTGC GTCCGAAGAC GCTCGGCGAG
GTCATCGGCC AGCAGCACCT GCTGGGGCCG GGCATGCCGC TGCGCATTGC CTTCGAATCG
GGCCAGCCGC ATTCGTGCAT CCTCTGGGGG CCGCCCGGCA CCGGCAAGAC GACCATCGCG
CGGCTGATGG CCGATGCCTT CGATGCGCAG TTCCTCAGCA TCAGCGCGGT GCTCGGCGGC
GTGAAGGACA TCCGCGATGC GGTCGAACGC GCCACGGCGG CGCGCGACGG CCTGGAGCAG
CGGCGCACGA TCGTCTTCGT CGACGAGGTG CACCGCTTCA ACAAGAGCCA GCAGGATGCC
TTCCTGCCGC ATGTGGAATC GGGGCTCTTC ACCTTCATTG GCGCCACCAC CGAGAACCCC
TCGTTCGAGG TCAACTCGGC CTTGCTTTCG CGTGCGGCCG TGTACGTGCT GCAACCGCTC
ACCGAGGCCG ACCTCAAGCA GATCGTGGCC AAGGCGCAGG CCATCCAGGC AGTGCCGGGC
ATCGAGGACA CGGCCATCGA CCGGCTCGTC GCCTATGCCG ACGGCGATGC GCGGCGCCTG
CTCAACACGC TCGAGACGCT GGCCGTCGCG GCCCGCGCCG AGAAGCTCGG CCACATCACC
GACGAATGGC TGCTGCGCGT GCTCGGCGAA CGCATGCGGC GCTACGACAA GGGCGGCGAG
CAGTTCTACG ACACCATCAG CGCGCTGCAC AAGTCGGTGC GCGGCAGCGA CCCCGACGCC
TCGCTCTACT GGTTCGTGCG CATGCTCGAC GGCGGCGCCG ATCCGCGCTA CATGGCGCGC
CGGCTGGTGC GCATGGCCAG CGAGGACATC GGCCTGGCCG ACCCGCGGGC GCTCCGGCTC
GCGCTCGACG CCGCCGAGGT GTATGAGCGC CTGGGCACGC CCGAAGGCGA ACTCGCGCTG
GCCGAGTGCG TGGTCTACCT GGCGATGGCA CCCAAGTCGA ATGCGGTCTA CACCGCCTAC
AACGCCGTGC GCGCGCTCAT CAAGAAGGAC AGCACCCGCC CGGTGCCGAT GCACCTGCGC
AACGCGCCCA CCAAGCTCAT GAAGGACCTC GACTACGGCA AGGGGTACCG CTACGCGCAC
GACGAGGAGG GCGGCTTTGC CGCGGGCGAG CGCTACCTGC CCGATGGCCT CGAGGGCCAG
GTTTTCTACC AGCCCGTCGA GCGCGGGCTT GAAATCCGCA TCGCGGAGAA GCTGCGCGAA
CTGCGCCGCC TGAACGGCCA GCGCGAGGAG TGA
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| Protein sequence | MATSSHQPLA ERLRPKTLGE VIGQQHLLGP GMPLRIAFES GQPHSCILWG PPGTGKTTIA
RLMADAFDAQ FLSISAVLGG VKDIRDAVER ATAARDGLEQ RRTIVFVDEV HRFNKSQQDA
FLPHVESGLF TFIGATTENP SFEVNSALLS RAAVYVLQPL TEADLKQIVA KAQAIQAVPG
IEDTAIDRLV AYADGDARRL LNTLETLAVA ARAEKLGHIT DEWLLRVLGE RMRRYDKGGE
QFYDTISALH KSVRGSDPDA SLYWFVRMLD GGADPRYMAR RLVRMASEDI GLADPRALRL
ALDAAEVYER LGTPEGELAL AECVVYLAMA PKSNAVYTAY NAVRALIKKD STRPVPMHLR
NAPTKLMKDL DYGKGYRYAH DEEGGFAAGE RYLPDGLEGQ VFYQPVERGL EIRIAEKLRE
LRRLNGQREE
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