| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_1252 |
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| Symbol | |
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| ID | 7973176 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 1365312 |
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| End bp | 1366238 |
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| Gene Length | 927 bp |
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| Protein Length | 308 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644791849 |
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| Product | transcriptional regulator, LysR family |
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| Protein accession | YP_002943169 |
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| Protein GI | 239814259 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGAAGA ACGCCACGGA GGAAGTCTCG CTGCAGCAGC TGCGGGCGCT GGCGGCGGTC
GCCGAATCGG GCAGCTTCAC ATTGGCAGCG GAAAGCCTGC AGCTGACGCA GCCGGCCATC
AGCCACCTGG TCAAGCGCAT GGAAGAGCAG CTCGGACAGC CGCTCATCGT GCGCGGCCGC
CGTATCCAGT TCACGAGCGC GGGCCAAGTG ATGGTCGAGA CCGCCGTGCG GGCGCTGCGG
ATGATCGATG AATCGGTGGA CGCCTGCCGC TCGCAGTCGC AGCTGCGCGA AGGACGCGTG
GTGCTGGCCG TGGGCCACCT CACGGCGGGC GCCCTGCTGC CGCCGATGCT CGGCCGCTTC
TCGCAAAAGC ACCCCACGCT GGCCACCACG CTGCTGGACA GCACCGCGGA GCAGATGATC
TCGCGCATCC TCTCGCAGGA GGCCGACCTG GGCTTCGGCT CGGACATCGG CCAGAAGCAC
TCGGAGCTGG CGACCGAGCC GCTGTTCACC GAGCGCATGG CCCTCTTCGT ACGCGACGAC
CATCCGCTGG CCCAGCGCGT GGTGGTCGAT GCCCGGCAGC TCGAGGCGCT GCCCTTCATC
CACGTGAACC CCGACGCCAA CGTGTGGCGC GCCGTGAGCC GCCAGCTGTC GAGCATGGCG
AATGTGTATC CGCGCGTGGT CCACCATGTG TCGATGCTGT CGACAGCCTT CGGCCTGATC
CAGGCGGGCG CGGGTGTGGC GCTCCTGCCG CGCTATGTGG AGGTGCTGAT GCCCGGCAAC
CTGCGCGCCG TGGCTGTCAC GCGCCCGGCG CTCGAATACC CGGTCGTCGC CATCCGCCTG
GCCAAGCATC CGCTCAATCC CGCGGCCATG GCTTTTCTCA CCATGGCACG ACAGCACATG
AAACCACCAA GGGCTGCCAG GCCCTGA
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| Protein sequence | MTKNATEEVS LQQLRALAAV AESGSFTLAA ESLQLTQPAI SHLVKRMEEQ LGQPLIVRGR
RIQFTSAGQV MVETAVRALR MIDESVDACR SQSQLREGRV VLAVGHLTAG ALLPPMLGRF
SQKHPTLATT LLDSTAEQMI SRILSQEADL GFGSDIGQKH SELATEPLFT ERMALFVRDD
HPLAQRVVVD ARQLEALPFI HVNPDANVWR AVSRQLSSMA NVYPRVVHHV SMLSTAFGLI
QAGAGVALLP RYVEVLMPGN LRAVAVTRPA LEYPVVAIRL AKHPLNPAAM AFLTMARQHM
KPPRAARP
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