| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_1221 |
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| Symbol | |
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| ID | 7973145 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 1334262 |
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| End bp | 1335734 |
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| Gene Length | 1473 bp |
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| Protein Length | 490 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644791818 |
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| Product | N-acyl-D-amino-acid deacylase |
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| Protein accession | YP_002943138 |
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| Protein GI | 239814228 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3653] N-acyl-D-aspartate/D-glutamate deacylase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAGCGATC GATCGAAAGC CATCCTGCTC GAGGCCGGAC TCGTGGTCGA CGGCTCGGGC
GGGCCTTCGT GGCCCGGCGA CGTGCTGCTG CAGGGCGACC GCATTCTTGC GCTCGGCGAG
GGCCTGCGCG GGCGGCTGCC CGAAGGCCTC GCGCCCGAAG ACGTCGAGAT CGTCGACTGC
CGCACGAAGG TGATCGCACC CGGCTTCATC GATGCGCACA CGCACGACGA CGCCATCGTG
CTGCGCGACC CGCTGTGCCT GCCGAAGGTG TCGCAGGGCA TCACCACCGT GGTGACGGGC
AACTGCGGCA TCTCGCTCGC ACCGTACCGC ACGCCGCAGT CCAAGCCGCC GCTCACGCTG
CTGGGCGCGG AATCGTTCAA GCATGCGACC ATGGCCGAGT ACCGCGCGGC CGTCGATGCC
GTGCAGCCCG CGCTCAACGT GGCGGCGCTG GTGGGGCACA CCACCTTGCG CTTCGCTGCG
ATGGAAGCGC TTGATCGTCC GGCCAGCGGC GACGAGCTCG CGCGCATGGC GGCGCTGCTC
GAGGGCTGCA TGGCCGAGGG CGCGCATGGC TTGTCGTCGG GGCTGTTCTA TGAAGAAGCA
TTTGCTGCGC CGGCCGAAGA AGTGACCGCG CTCGCACGCG TCGTGGCAAG GCACGGCGGC
GTCTACGCCA CGCACCTGCG CAGCGAGATG CAGCAGATCA TCGAGGCGCT GCATGAAGCG
GGCGACACCG CTTTCAGCGC CGGCGTGCCA CTGGTCATTT CGCACCACAA GTGCGCGGGC
CCCGCCAACT GGGGCCGCAC GAAGGAAACG CTGCCCTTGA TCGAAGCGCT CGCGCAGCGG
CAGAAAATAT CGATGGACGT GTACCCCTAC GTGGCCGGTT CCACCGTGCT GCGCGAAGAC
CTGGTCGACG GCGTCATCGA CGTGCTGCTG ACCTGGTCCG ACCCGTACCC CGAGATGACC
GGCCGCCTGA TCTCCGACAT CGCGCGCGAG TGGGGCACCA CCGAGCAGGA GGCGTGCTTG
CGCCTCAAGC CTGGTGGCGC CTGCTACTTC CAGATGCAGG AAGAAGACGT GGAGCGCGTC
ATTGCGCATC CGCTCACCAT GATCGGCAGC GACGGCCTGC CGCACGACCG CCATCCGCAT
CCGCGGCTGT GGGGTGCGTT CCCGCGCGTG TTCGCGCGCT ACTGGCGCGA GCGCCGCCTG
TTCACGCTCG AGCAGGCCGT GCACAAGATG ACCGGCATGA CCGCGCGCAA CCTGCGCATC
GCAGACCGCG GGTTGCTGCG TGTGGGTGCA ATGGCCGACG TGGTGGTGTT CGACCCCGAG
ACCATCGCCG ACACCGCCAC CTACGACAAG CCGCACGGCG TGAGCCTGGG GGTGGAGCGG
GTGTTCGTGA ATGGGGTGCT CGCGTATAGG GGCGGTGATG CTGAAGCGAA GGTGCTTGCG
CGGGCGGGGC GGATGCTGAC TCGCGGGAGC TGA
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| Protein sequence | MSDRSKAILL EAGLVVDGSG GPSWPGDVLL QGDRILALGE GLRGRLPEGL APEDVEIVDC
RTKVIAPGFI DAHTHDDAIV LRDPLCLPKV SQGITTVVTG NCGISLAPYR TPQSKPPLTL
LGAESFKHAT MAEYRAAVDA VQPALNVAAL VGHTTLRFAA MEALDRPASG DELARMAALL
EGCMAEGAHG LSSGLFYEEA FAAPAEEVTA LARVVARHGG VYATHLRSEM QQIIEALHEA
GDTAFSAGVP LVISHHKCAG PANWGRTKET LPLIEALAQR QKISMDVYPY VAGSTVLRED
LVDGVIDVLL TWSDPYPEMT GRLISDIARE WGTTEQEACL RLKPGGACYF QMQEEDVERV
IAHPLTMIGS DGLPHDRHPH PRLWGAFPRV FARYWRERRL FTLEQAVHKM TGMTARNLRI
ADRGLLRVGA MADVVVFDPE TIADTATYDK PHGVSLGVER VFVNGVLAYR GGDAEAKVLA
RAGRMLTRGS
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