| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_1206 |
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| Symbol | |
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| ID | 7973376 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 1318564 |
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| End bp | 1319352 |
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| Gene Length | 789 bp |
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| Protein Length | 262 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644791803 |
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| Product | protein of unknown function DUF1275 |
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| Protein accession | YP_002943123 |
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| Protein GI | 239814213 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3619] Predicted membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGCAGAC TACGCTTCCT TACCCACCGC CACCGCGCAC CCTCCACCAA CCGGGTGCTC
GGCCTGCTGC TGGCCTTCAA TGCCGGTGCC GTGAATGCGG GCGGGTTCCT GGTGCTGCAC
ATGTACACCT CGCACATGAC GGGCTTCGCA TCGCAGTTTG CGGACGGGCT GGTGCTGGGC
AACACCAAGC TGCTGCTCAA TGCGCTGGGC GCCATCCTCG CCTTCCTGGC GGGTGCGGCG
GTCTGCGCCA TTCTGGTGAA CTGGGGCCGC CAGCACCGGC TGCGCAGCGT CTATGCGGTG
CCGCTGCTGC TGGAAGCCGC GCTCATGTTC CCGTTCGGAT TGATGGGCGC TATCACGCTG
ACCTGGCCGA CCCCGTTTGC GGTTCCGCTC ACGGTGCTGC TGCTGTCCTT CATCATGGGG
CTGCAGAACG CCGTCGGCTC CAAGACCTCC GGCGGCAGCG TCCGCACCAC CCACATGACG
GGCAACATCA CCGACGTGGG CATGGAGCTG GGCAAGCTGC TCTACTGGAA CCGGCATGCC
ACGCCGGCGC ATGCGATGGT GCGCCACAAC CGCCGCCGGA TGCAGATGGC GGGCGGGCTT
GTCGGCATGT TCGTGCTGGG CGGCATCGTC GGCGCGCTGG GCTTCAACTA CATCGGCTTC
GTCTGCGTGG TGCCGCTGGC GGCGCTGCTG CTGGCCATCT CCATCCCGCC GCTCATGGAG
GACGCGCCGC GCTCCAGGCC GCTGCAGAAG CTCTTGGCCG CCTTCAGACG GCGCCCACGC
TGCCCGTGA
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| Protein sequence | MRRLRFLTHR HRAPSTNRVL GLLLAFNAGA VNAGGFLVLH MYTSHMTGFA SQFADGLVLG
NTKLLLNALG AILAFLAGAA VCAILVNWGR QHRLRSVYAV PLLLEAALMF PFGLMGAITL
TWPTPFAVPL TVLLLSFIMG LQNAVGSKTS GGSVRTTHMT GNITDVGMEL GKLLYWNRHA
TPAHAMVRHN RRRMQMAGGL VGMFVLGGIV GALGFNYIGF VCVVPLAALL LAISIPPLME
DAPRSRPLQK LLAAFRRRPR CP
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