| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_1194 |
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| Symbol | |
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| ID | 7973363 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 1305498 |
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| End bp | 1306565 |
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| Gene Length | 1068 bp |
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| Protein Length | 355 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 644791790 |
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| Product | glycosyl transferase group 1 |
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| Protein accession | YP_002943111 |
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| Protein GI | 239814201 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0438] Glycosyltransferase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.169515 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGATAT TGCACGTTGC CGAAACGCTC AAGGGCGGGC TCGAAACCTA TCTTCGGCTG
GTTTCGGGCT TTCAGCAGAA CTCTCCCGTG ATCAGCCAGG CCAAGTTCAT CTTGCCCGGC
CCGGTGGAGT GGCTGGACTC CCGGGACACG CATGTGGTCC CCACGGCCCG CAGTCCTCTT
GCCCTTGCAA GCTACGCCGC CGAGATCAAG AAAATCATCC GCTCGGAGCG CCCCACGGTG
CTGCACCTGC ACAGCTCGAT TCCGGGCGGG ATCGTTCGCG CCATGGCGCT GCTCGGCCAG
GTGCCGGCCG AGACCAAGAT CGTCTATTGC TCGCACGGCT GGGCCTTCGA CCAGGTCGGG
CCTTCGTACA AGAAGTCGAT CTATCGGTGG ATCGAATGGC TGCTGTCCCA TTGGAGCGAC
GCGATCATCT GCATCAGCGG CCACGAGTTT CGGGTGGCCG AGAAATTCGG CATCAAGCGG
TGCAAGTGCA TTCCGAACGG GATCCAGCCC ACCGCGCCCA TTGCGGAAAA CACGGTGGCT
CCCAGGGCCC CGGCACGGCC CCGAAGAGTC CTTTTCGTGG GGCGGCTCGA CCGGCAGAAG
GGCATCGATG CCTTGCTCGA CGCCTATGCC CGCGTCCAGC CCGGCTTCAA GCTCGTGATC
GTGGGCGGCG CCGTCAGGAA CGATCTTTCC CTTGCGCGCT CGAGCGAGAT CGAGTTCGCC
GGATGGCTCG AGAAGGACGA GCTCGAAGAA GCCTACCGGT CATGCGACGC GGTCATCGTT
CCCTCCCGGT GGGAAGGCTT CGGCCTTGTC GCGGTCGAGG CCATGGCGCG CAGCAAGCCG
GTTTTTGCAT CCGCCGTGGG CGGCCTGGTC GACATCGTCG AAGACGGCAG GAACGGAAGG
CTGTTTTCGC TCGACGCGCT GGACGACGTG CTGCGCGAGA TCGATCGGAT CTCCGATGAG
GAATTGCAGC GGATGGGGCG TGCCGGCCGG CAGATTTTCG AAGAGAAATA CACCGCCGAC
CGAATGAACG CCGCCATCCT GGACTTGTAC AAGGAGTCGG TACAGTGA
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| Protein sequence | MKILHVAETL KGGLETYLRL VSGFQQNSPV ISQAKFILPG PVEWLDSRDT HVVPTARSPL
ALASYAAEIK KIIRSERPTV LHLHSSIPGG IVRAMALLGQ VPAETKIVYC SHGWAFDQVG
PSYKKSIYRW IEWLLSHWSD AIICISGHEF RVAEKFGIKR CKCIPNGIQP TAPIAENTVA
PRAPARPRRV LFVGRLDRQK GIDALLDAYA RVQPGFKLVI VGGAVRNDLS LARSSEIEFA
GWLEKDELEE AYRSCDAVIV PSRWEGFGLV AVEAMARSKP VFASAVGGLV DIVEDGRNGR
LFSLDALDDV LREIDRISDE ELQRMGRAGR QIFEEKYTAD RMNAAILDLY KESVQ
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