| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_1173 |
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| Symbol | |
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| ID | 7973342 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 1286697 |
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| End bp | 1288004 |
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| Gene Length | 1308 bp |
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| Protein Length | 435 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 644791769 |
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| Product | sodium:dicarboxylate symporter |
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| Protein accession | YP_002943090 |
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| Protein GI | 239814180 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1301] Na+/H+-dicarboxylate symporters |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGAGAA AACTGCCGGC CGCCGCCTGG ATCCTGATCG CCATGGTGCT CGGCATCCTT
GTCGGCTACA TGATCTTCAC GAGCTTTCCC GACAAGAAGG CCGCGGCGCA GATCGCAGGC
TACGTGTCGA TTGTGTCGGA CGTGTTTCTG CGCCTCATCA AGATGCTGAT CGGCCCGCTG
GTGTTCTCCA CGCTGGTGGT GGGCATCGCG CACATGGGCG ACGCCAAGTC GGTGGGCCGG
GTGTTCGGCA AGTCGCTGGG CTGGTTCCTC ACTGCTTCGC TGATCTCGCT GGTCATCGGC
CTGGTCATGG CCAATGTGCT GAAGCCCGGC GAGAACCTGG GCCTTCCGCT GCCGGACATC
GGCGCTTCGG CCAACCTGGC GACCGCGAAG TTCACGCTCA AGGACTTCGT GAGCCACATG
GTGCCGAAGT CCTTTGCCGA GGCCATGGCC AACAACGAGA TCCTGCAGAT CGTGGTGTTC
TCGATGTTCT TCGGCGTGGC GCTCGCCTCG CTCGGCGACA AGGCCAGGAC GCTGGTGGCC
GCCATCGACG AACTCTCGCA CGCCATGCTC AAGATCACCG GCTACGTGAT GAAGCTGGCG
CCGCTCGCGG TGATGGCCGC CATGGCCGCC ACGGTTGCGA CGAACGGCCT GGGCATCCTG
CTCAAGTTCG CGGTCTTCAT GGGCGACTTC TACCTGGGCC TGTTCGTGCT GTGGGGCGTG
CTGGTGTTCG CGGGCTTTTC GTTCCTGGGC CCGCGCGTGT TCAAGCTGCT GGCACTCATC
AAGGAAGCCT TCCTGCTGTC GTTCGCCACG GCCAGCTCGG AAGCGGCCTA CCCGAAGATC
CTGCAGGCGC TCGACCGTTT CGGCGTGAAG CGCAAGATCT CGAGCTTCGT GATGCCGATG
GGCTATTCGT TCAACCTGGA CGGCTCGATG ATGTACTGCA CCTTCGCCGT GCTGTTCATC
GCGCAGGCCT ACAACATCCA CATGCCGATC AGCACGCAGA TCACGATGCT GCTGATCCTG
ATGCTCACCT CCAAGGGCAT GGCTGGCGTG CCGCGCGCTT CGCTGGTGGT GATTGCGGCC
ACGCTCAACC ACTTCGACAT TCCGGAAGCC GGCCTGCTGC TGATCCTGGG CGTCGACACC
TTCCTGGACA TGGGGCGCTC GGCCACCAAC GCGGTGGGCA ACTCCATCGC GACGGCCGTG
GTCGCCAAGT GGGAGGGCGA GCTGCTCTCC GAGAGCGACG CGGCGGCCAA TGCGAGGACG
CTCGACGCCG AAGCCTCGGC CACCCTCGCC CATCCGGCCC ACGCGTGA
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| Protein sequence | MKRKLPAAAW ILIAMVLGIL VGYMIFTSFP DKKAAAQIAG YVSIVSDVFL RLIKMLIGPL
VFSTLVVGIA HMGDAKSVGR VFGKSLGWFL TASLISLVIG LVMANVLKPG ENLGLPLPDI
GASANLATAK FTLKDFVSHM VPKSFAEAMA NNEILQIVVF SMFFGVALAS LGDKARTLVA
AIDELSHAML KITGYVMKLA PLAVMAAMAA TVATNGLGIL LKFAVFMGDF YLGLFVLWGV
LVFAGFSFLG PRVFKLLALI KEAFLLSFAT ASSEAAYPKI LQALDRFGVK RKISSFVMPM
GYSFNLDGSM MYCTFAVLFI AQAYNIHMPI STQITMLLIL MLTSKGMAGV PRASLVVIAA
TLNHFDIPEA GLLLILGVDT FLDMGRSATN AVGNSIATAV VAKWEGELLS ESDAAANART
LDAEASATLA HPAHA
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