Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Vapar_1134 |
Symbol | |
ID | 7969656 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Variovorax paradoxus S110 |
Kingdom | Bacteria |
Replicon accession | NC_012791 |
Strand | + |
Start bp | 1247007 |
End bp | 1248017 |
Gene Length | 1011 bp |
Protein Length | 336 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 644791730 |
Product | putative sulfite oxidase subunit YedY |
Protein accession | YP_002943051 |
Protein GI | 239814141 |
COG category | [R] General function prediction only |
COG ID | [COG2041] Sulfite oxidase and related enzymes |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.843909 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCGTTCC ATTTCCGTCC GCAGGGTCGC AGCAGCGGCT TCATCCACCC GCTTTCGAGC GAGATCACGC CGCGCGCCGT CTACGAGGGC CGGCGAGACC TGCTCAAGCT GATGGCCGGC GGCGCAGCCG GTGCCGCGCT CGCGAGCTTT GCGGGGCGCG AGGCCTTCGC CCAGGCCACG GGACCGCACA AGCTGGCACT GCTGCCGGGT GCCAAGTCCG CCGTGCCGGG CGCGCAAACG ATGGAAAAGC TCACCGAGTA CAAGGACGCG ACGAGCTACA ACAACTTCTA CGAGTTCGGC ACCGACAAGG GCGACCCGGT CAAGAACGCC GGCACCCTGA AGACCCGCCC CTGGACCGTG GAGGTCGAGG GCCTGGTCAA GAAGCCCGGC AAGTACGGCA TCGAAGACCT GCTCAAGCTC AGTGCGCAGG AAGAGCGCAT CTACCGCCTG CGCTGCGTCG AGGGGTGGTC GATGGTCATT CCCTGGGTGG GCTACTCGCT GGCCGAGCTC ATCAAGAAGG TCGAGCCGCA GGGCAATGCG AAGTACGTCG AATTCGTGAC CCTGGCCGAT CCCAAGACCA TGCCCTTCGT GGGCTCGCGC GTGCTCGACT GGCCCTACAC CGAAGGCCTG CGCATGGACG AGGCCATGCA TCCGCTCACG CTGCTGGCTT TCGGCATGTA CGGCGAGGTG CTGCCCAACC AGAACGGCGC GCCGGTGCGC ATCGTGGTGC CGTGGAAGTA CGGCTTCAAG TCGGCCAAGT CGATCGTCAA GATCCGCTTC GTCGAGAAGG AGCCGGGCAC GGCCTGGAAC AAGGCGGCGG CGCAGGAATA CGGCTTCTAT TCGAACGTCA ATCCGAACGT CGACCATCCG CGCTGGAGCC AGGCCACCGA GCGCCGCATC GGCGACGGCG GCGGACTCTT CGCCAAGCGC ACCAAGACGC TGGTCTTCAA CGGCTACGAA GCCCAGGTCG GCCAGCTCTA TGCGGGCATG GACCTGAAGA AGAACTACTG A
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Protein sequence | MSFHFRPQGR SSGFIHPLSS EITPRAVYEG RRDLLKLMAG GAAGAALASF AGREAFAQAT GPHKLALLPG AKSAVPGAQT MEKLTEYKDA TSYNNFYEFG TDKGDPVKNA GTLKTRPWTV EVEGLVKKPG KYGIEDLLKL SAQEERIYRL RCVEGWSMVI PWVGYSLAEL IKKVEPQGNA KYVEFVTLAD PKTMPFVGSR VLDWPYTEGL RMDEAMHPLT LLAFGMYGEV LPNQNGAPVR IVVPWKYGFK SAKSIVKIRF VEKEPGTAWN KAAAQEYGFY SNVNPNVDHP RWSQATERRI GDGGGLFAKR TKTLVFNGYE AQVGQLYAGM DLKKNY
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