| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_1076 |
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| Symbol | |
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| ID | 7969598 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 1180810 |
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| End bp | 1182021 |
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| Gene Length | 1212 bp |
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| Protein Length | 403 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 644791672 |
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| Product | General secretion pathway L |
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| Protein accession | YP_002942993 |
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| Protein GI | 239814083 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3297] Type II secretory pathway, component PulL |
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| TIGRFAM ID | [TIGR01709] general secretion pathway protein L |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCCCGC TGCTGCTCAT CGCTCCCCTC CCCCCGGCCG ACGCCGCGGG CGAGTACGAC
TGGGCCCAGG CTGGCGACGA CGGCATCGCC CTGCGCAACC ATGGCCGCGC GCTGCTCGCG
CTGTTGCCGG CCAGCGCGGA AGTCACGCTC GGCATTCCGG CCGCGGCGCT GTCCTGGCAC
CGCGTCACGC TGCCCAAGGG CAGCACGAGC AGCGCGTCGA AGCTGCGCGC CGTGCTCGAC
GGCCTGCTCG AAGAGCATCT GCTCGACGAT CCCGAGGCCC TGCACTTCGC ACTCGAGCCC
GCGGCCAAGG CCGGCGCGCC GGTCTGGGTG GCGGCCTGCA ACCGCATCTG GCTGCGCACG
CTGGTGCAGG GGCTGGAGTC GGCCGGGCGG CGCGTGGTGC GCATCGTTCC CGAATTCGCG
CCGCAGCCCG CGGACGGCCC GCCGCTGCTG CAGGTCACCG GCGAAGCCGA GGCGCCGCAG
CTCACGGTGT GCGATGCCGA CGGCGTGGTC TCGCTGCCGC TCGCGGGCGC CGGGCTGGCG
CTGGCCGCCG GCCTGCCGCT GGACACCGCC GTGATCAGCG CCGAGCCCGC CGTCGCGCAA
GCCGCCGAGC ACCTGCTCGA GCGCCGCGTG CCCATCGTGC AGGCGCCGCA GCGCTGGCTG
CAGGCGGCGC GCTCGCCCTG GGAGCTCGCG CAGTTCGACC TCGCCGTGAC GGGGCGTGCC
CGCGCCGGCA AGAAATTTGC GTCGGTGGTG CAGACGCTGC GCTATGCGCC CGAGTGGCGC
GCCGCGCGCT GGGGCATCGT CGCCCTGCTG CTGACCCAAC TGATCGGCCT CAATGCCTGG
GCCTGGAAGG AGCGCAATGC ACTCGAGGCC AAGCGCCAGG CCGTCAAGAC CATGCTGACC
CGGACCTTCC CCTCCGTGAA ACTCGTGGTC GACGCGCCGC TGCAGATGGC GCGCGAGGTC
GCGGCGCTGC AGCAGGCCGT GGGCGATGTC GCGGGCAGCG ACCTCGAACC GATGATCGGC
GCGCTCGCTC CCCATCTTCC GCCGGGCAGG ACGCCCAGCG CCATCGACTA CAGCGCCGGC
CAGCTGCGCC TGCGCGGGCT GGGCCTGCAG CCTTCGGAGC TCACGCGGCT CTCGGGCGCG
ATGGGCCCGC GCGGCTACAG CGTGCGCGCC GAAGGCGACC TGCTGCTGGT GCAGGCCGAG
GCTGCGCGAT GA
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| Protein sequence | MTPLLLIAPL PPADAAGEYD WAQAGDDGIA LRNHGRALLA LLPASAEVTL GIPAAALSWH
RVTLPKGSTS SASKLRAVLD GLLEEHLLDD PEALHFALEP AAKAGAPVWV AACNRIWLRT
LVQGLESAGR RVVRIVPEFA PQPADGPPLL QVTGEAEAPQ LTVCDADGVV SLPLAGAGLA
LAAGLPLDTA VISAEPAVAQ AAEHLLERRV PIVQAPQRWL QAARSPWELA QFDLAVTGRA
RAGKKFASVV QTLRYAPEWR AARWGIVALL LTQLIGLNAW AWKERNALEA KRQAVKTMLT
RTFPSVKLVV DAPLQMAREV AALQQAVGDV AGSDLEPMIG ALAPHLPPGR TPSAIDYSAG
QLRLRGLGLQ PSELTRLSGA MGPRGYSVRA EGDLLLVQAE AAR
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