| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_1052 |
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| Symbol | |
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| ID | 7972023 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 1152762 |
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| End bp | 1153679 |
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| Gene Length | 918 bp |
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| Protein Length | 305 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644791648 |
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| Product | dihydrodipicolinate synthetase |
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| Protein accession | YP_002942969 |
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| Protein GI | 239814059 |
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| COG category | [E] Amino acid transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0329] Dihydrodipicolinate synthase/N-acetylneuraminate lyase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCCCCA GATACCGCGG CATCTTCCCG GTGGTGCCGA CCACCTTCAC CGAACAGGGC
GCGCTCGACC TCGAGAGCCA GAAGCGCTGC GTCGACTTCA TGATCGACGC GGGCTCGGAC
GGCCTGTGCA TCCTGGCCAA CTTCTCCGAG CAGTTCGTGC TGTCCGACGA CGAGCGCGAG
GTGCTCACGC GCACGGTGCT CGAGCATGTG GCGGGCCGCG TGCCCGTGAT CGTCACCACC
ACGCACTACA GCACCCGCAT CTGCGCCGAG CGCAGCCGGC GCGCGCAGGA CATGGGCGCC
GCCATGCTGA TGGTGATGCC GCCCTACCAT GGCGCCACCT TCCGCGTGCC GGAGCCGCAG
ATCTTCGAGT TCTACGCCGG CCTGTCCGAT GCGGTGAACA TCCCGATCAT GATCCAGGAC
GCGCCCGCGA GCGGCACGCT GCTGTCGGCG GCCTTTCTCG CGCGCATGGC TCGCGAGATC
GAGCACGTCG CCTACTTCAA GATCGAAACG GCCGGTGCCG CGTCGAAGCT GCGCGAGCTG
ATCCGCCTGG GCGGCGATGC CGTCGAAGGC CCGTGGGACG GCGAAGAGGC CATCACGCTG
ATGCCCGACC TCGATGCCGG CGCCACCGGC TCGATGACCG GCGGCGGCTA TCCCGACGGC
ATCCGCCCGA TCATCGAGGC GCACCGCGCG GGCGACCGCG ACAAGGCCTT CGCGCTCTAC
CAGCAGTGGC TGCCGCTCAT CAACTACGAG AACCGCCAGG CGGGCCTCCT GGCCTGCAAG
TCGCTCATGA AGGAGGGCGG CGTGATCGCT TGCGAGGCGC CGCGCCATCC GCTGCCGGCG
ATGCACCCCG AGACGCGCGC CGGCCTGATC GAGACGGCGA AGCGGCTCGA CCCGATGGTG
CTGCGCTGGG GGGGTTGA
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| Protein sequence | MTPRYRGIFP VVPTTFTEQG ALDLESQKRC VDFMIDAGSD GLCILANFSE QFVLSDDERE
VLTRTVLEHV AGRVPVIVTT THYSTRICAE RSRRAQDMGA AMLMVMPPYH GATFRVPEPQ
IFEFYAGLSD AVNIPIMIQD APASGTLLSA AFLARMAREI EHVAYFKIET AGAASKLREL
IRLGGDAVEG PWDGEEAITL MPDLDAGATG SMTGGGYPDG IRPIIEAHRA GDRDKAFALY
QQWLPLINYE NRQAGLLACK SLMKEGGVIA CEAPRHPLPA MHPETRAGLI ETAKRLDPMV
LRWGG
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