| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_1039 |
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| Symbol | |
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| ID | 7972010 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 1136734 |
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| End bp | 1137807 |
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| Gene Length | 1074 bp |
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| Protein Length | 357 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644791635 |
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| Product | Aldose 1-epimerase |
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| Protein accession | YP_002942956 |
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| Protein GI | 239814046 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2017] Galactose mutarotase and related enzymes |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.594028 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCAGCA ACATCACCAC CCGCGAATTC GGCCGCATGC CCGACGGCCG CATCGTGACC
GAATACACCC TGGACAACGG CCTGGGCCTG CGCCTGGGTG CCATCAACCA TGGCGGCATC
GTCACCGCAT TGCACGTGCC CGACCGGCAT GGGCACAGCG GCAACATCGT GCTCGGCCTG
CCGAGCCTTG CGGACTACCT GGGCCCGCAT CCGCACCTGG GCACCATCGT CGGGCGCTAT
GCGAACCGGA TCGCGGGTGG GCGCTTCACG CTCGATGGCG CCCAGCACCA GCTCCCGCTG
AACAACGGCG CCAACTCGCT GCACGGCGGG CACCGGGGCT TCGGCACGCG CTTCTGGCAG
ATCGAGCCGG TGCCGGCGGA CGGCGCGGCG GGCGAGGAAA TCGCCATCGA GCTTCGCTAC
ACCAGCGCCG ATGGCGAAGA AGGCTTTCCG GGCGAAGTGC AACTGACGGT GCGCTACGCG
CTCAGCACCC GCGAGAACAC CTGGCGCATC GACTACCGCG CCGTGACCGA CCGGCCCACG
GTGCTGAACC TGAGCCACCA CGACTACTTC AACCTGGCGG GCGAGGGCGC GGTGCTGGAC
CATCGGCTCA TCATTCCCGC GAGCCGCTAC TGCCCCGTGG ATGCAGGCCT GATTCCGCTC
GGCCTTGCGC CGGTGGCCGG AACGCCATTC GACTTCCGCG CGGCCACGCC GGTCGGCGAG
CGCATCGATG CGCCGCACGA GCAATTGCGC GTCGCCGGCG GCTACGACCA CAACTGGGTG
CTCGACCGCG AGCCCGCCGG CCTGGCGCTG GCGGCGCGGC TCGAGCACCC GCCGTCAGGG
CGCGTGATGG AGGTGCACAC GACCGAGCCG GCGGTGCAGT TCTATTCGGG CAACTTCCTC
GACGGCAGCC TGCGCGGCGC CGATGGCGAG AGCTTGCGGC GCGGCGCCGG GTTGTGCCTG
GAAACGCAGC ACTATCCCGA TTCGCCGAAC CAGCCGGACT TTCCTTCGAC GGTGCTGCGG
CCGGGCGAAG TGTTCAACAG CAGCACGCTG CACCGCTTCG GCACACTGGC CTAG
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| Protein sequence | MSSNITTREF GRMPDGRIVT EYTLDNGLGL RLGAINHGGI VTALHVPDRH GHSGNIVLGL
PSLADYLGPH PHLGTIVGRY ANRIAGGRFT LDGAQHQLPL NNGANSLHGG HRGFGTRFWQ
IEPVPADGAA GEEIAIELRY TSADGEEGFP GEVQLTVRYA LSTRENTWRI DYRAVTDRPT
VLNLSHHDYF NLAGEGAVLD HRLIIPASRY CPVDAGLIPL GLAPVAGTPF DFRAATPVGE
RIDAPHEQLR VAGGYDHNWV LDREPAGLAL AARLEHPPSG RVMEVHTTEP AVQFYSGNFL
DGSLRGADGE SLRRGAGLCL ETQHYPDSPN QPDFPSTVLR PGEVFNSSTL HRFGTLA
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