| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_1035 |
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| Symbol | |
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| ID | 7972006 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 1128943 |
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| End bp | 1129926 |
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| Gene Length | 984 bp |
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| Protein Length | 327 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 644791631 |
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| Product | protein of unknown function DUF6 transmembrane |
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| Protein accession | YP_002942952 |
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| Protein GI | 239814042 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCCACCG CCAACCCACG CCCGCTCGGC ATTGCCGCGC TGCTGCTCGC CACCTCCGGA
TGGGGTGCCA TGTTCCTTGT CGGCAAGGAC GTCCTGCACC ACGTCGAACC CATGTGGCTC
ACGCTGATCC GCTACAGCAT GTCGGCCCTG CTGTTCGCCG CGCTGCTGCT GCCGCGCGGC
GCGGTGCCCT GGCGCAAGCT CCGCCTGCAT GCGGTGCCGC TGGCATTGCG GGGCGCCGCG
GGCTTCGGCG TCTTCAGCGT GATGCTGTTC GTCGGGCTCG CGCACTCGGT GCCTTCGCAC
GGCGCGGTGA TCGTGGCCAC CACGCCCATG ACTACGCAGC TGGTGCGCTG GGCCTTCGAT
GGCGTGCGGC CCGCGCGGCT GGCGCTGCTG GCAACGGCGC TGGCGCTCGC GGGCGTTGCC
ATGGTGTCGG GCCTGCTCTT TGGCGGCGCC TCGTCGGCCG GCTCGACGCT CTTCGGCGAC
GCGGTGGCCT TTGCCGGCAC GCTGGGCTGG ATCTGGTACA CGCGCGGCGC GGCGCGCTTT
CCGGCGCTCG ACGTGGTCGA GTATTCGGCG CTCACGGTGC TGGCTTCGTG GCCGCTGCTG
CTGGCGGGCG CGCTGCTCGC CACCGCCTTC GGCGCGAGCC ACGCACCCAG CGCCGAGGGC
CTGCGCCTGT CGTGGCACGC GCTGCTGTTC GTGGGCCTGG TGCCCTCCGC CATCTCCGTG
CTGGCCTTCA ACTATGGCGT TCGCACGCTG GGCGCCGTCA CCGGCACGGC CTTCCTGAAT
TTCGTTCCGG TGTCGGCCTT GCTGATGGGC GTCGCGCTGG GCAAGCTGCC ATCGGCTCAC
GAGCTGGCCG GCATGGCGAT GGTGGTCGGC GGACTGCTGC TGCATACGGC CGCGAGCCGC
AGGGCGGCAG CCGCACCCGC AGCGCGCGCC GCGGGCGGCA ACAGCACCGC GGGCTACCGC
GCCTGCGGCG CCAGCGCGCG ATAG
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| Protein sequence | MSTANPRPLG IAALLLATSG WGAMFLVGKD VLHHVEPMWL TLIRYSMSAL LFAALLLPRG
AVPWRKLRLH AVPLALRGAA GFGVFSVMLF VGLAHSVPSH GAVIVATTPM TTQLVRWAFD
GVRPARLALL ATALALAGVA MVSGLLFGGA SSAGSTLFGD AVAFAGTLGW IWYTRGAARF
PALDVVEYSA LTVLASWPLL LAGALLATAF GASHAPSAEG LRLSWHALLF VGLVPSAISV
LAFNYGVRTL GAVTGTAFLN FVPVSALLMG VALGKLPSAH ELAGMAMVVG GLLLHTAASR
RAAAAPAARA AGGNSTAGYR ACGASAR
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