Gene Vapar_0991 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVapar_0991 
Symbol 
ID7971962 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVariovorax paradoxus S110 
KingdomBacteria 
Replicon accessionNC_012791 
Strand- 
Start bp1089737 
End bp1090306 
Gene Length570 bp 
Protein Length189 aa 
Translation table11 
GC content71% 
IMG OID644791587 
ProductMgtC/SapB transporter 
Protein accessionYP_002942908 
Protein GI239813998 
COG category[S] Function unknown 
COG ID[COG1285] Uncharacterized membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCTGGG GCGGCCAGGT GCTCGACACC GTAGCGGCCG AATTCTCGGA CGTGGGCGAC 
GCCGCGCAGC TCACGCGCAT CGTCGTTCGG CTGATGCTCG CGGCCGTGAT CGGGTTCATG 
CTCGGCTTCG AGCGCGAGCA GCAGGGCAAG GCGGCGGGCG TGCGCACCCA CATGCTGGTG 
GCCATCGGCT CGGCGCTGTT CGTGCTGATT CCGCAGCAGA CGGGCATCGA GCCGGCCGAC 
ATGAGCCGGG TGATCCAGGG CCTGGTGGCG GGCGTGGGCT TTCTCTGCGC CGGCACCATC 
CTCAAGCGCG GCAAGGACGA GCACCATGTG CAGGGCCTCA CCACCGCCGC CGGGCTGTGG 
ATGACGGCCG CCATCGGCAT GGCCTGCGGC CTCGGCCGCG AAGTCACCGC CATCCTGAGC 
GCATTGCTGG CGCTGGCCGT GCTCGCGCTG GTGCCGCGGC TGGTGGACCT GGTCGAGCGC 
ATGGTCGGGC CGCCGCACGG CGAAGAAAAA GACCAGGCCG GCGCCGCGCC GCGCGTGATC 
GCCTCGCCTG AAGACGAGCA GCCGCGGTAG
 
Protein sequence
MSWGGQVLDT VAAEFSDVGD AAQLTRIVVR LMLAAVIGFM LGFEREQQGK AAGVRTHMLV 
AIGSALFVLI PQQTGIEPAD MSRVIQGLVA GVGFLCAGTI LKRGKDEHHV QGLTTAAGLW 
MTAAIGMACG LGREVTAILS ALLALAVLAL VPRLVDLVER MVGPPHGEEK DQAGAAPRVI 
ASPEDEQPR