| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_0982 |
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| Symbol | |
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| ID | 7971953 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 1079578 |
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| End bp | 1080504 |
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| Gene Length | 927 bp |
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| Protein Length | 308 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 644791578 |
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| Product | ROK family protein |
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| Protein accession | YP_002942899 |
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| Protein GI | 239813989 |
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| COG category | [G] Carbohydrate transport and metabolism
[K] Transcription |
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| COG ID | [COG1940] Transcriptional regulator/sugar kinase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGAGCCT GCGTTGACAT CGGCGGCACC AAGGTGGCCG TGAGCCTTTC CCCTTCGAGC
GATGCGCCGC TGGCCGGCCG CCGCAGCGAG CCGACGGCCA AGACCGGCGA CAACGACGCC
GTGGCGGTGC AGATCATGCG CATGATCGAC GAGGTCTGCG CCGAGCAGGG CATCGCGCCG
GCCGACATCG ACCGCGTGGG CGTCTCGTCC ACCGGCCCCT TCGAGCTGCG CGACGGCATG
GTGGAGCTGG CCACGCCCAA CATCTGCGGC GGCATTGCGG GGCCGGCGCG CGGCCTGCCC
AACAACTGGA TGACGGCAAT CATCGAAGCC CCGCTGGCCC GGCGCTTCGG CCGCGTGCGG
GTCGAGAACG ACGCCGTGGC CGCGCTCGAG GCCGAGCGCC ACTGGGGCGC GCTGCAGGGC
CTGGACCACT GCGCCTACGT CACCTGGAGC ACCGGCGTGG GCGTGGGCCT GTGCGTGGAC
GGCCGTGCGC TGCGTGGCAA GAACGGCAAT GCCGGCCATG CGGGCCACAG CTTCGTGGTG
GACGACGCCA GCGGTGCGCT CTGCGGCTGC GGCAACCTCG GCGACGTGGA GGCGCTGGTG
GCGGGCAACT CCATCGCGCG CCGCTTCGGG CAGCCCGCGC CCGACCTGTT CGCGGCCGCC
TCGGACGGCG AGCCGCACGC CGTCGAGATC GTCGATGCGC TGTGCCGCGT GATGGGCCGC
ATGATCTACA ACCTGATTGC CACGCTCGAT CTCCAGCGCA TCAGCCTGGG CGGCAGCGTG
TTCTGGCACC ACCGCGACTT CCTGCTGCCG CGGCTGCAGG CGCAGGTCGA CGGCAAGCTC
AAGCCGCTCA CGCGCGGCGT GCTGCTGGTG CCCGCGGGGC TTGGCGAAAA GGTCGGCGAC
TACGCCGCCC TGGCACTGCT CGACTGA
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| Protein sequence | MRACVDIGGT KVAVSLSPSS DAPLAGRRSE PTAKTGDNDA VAVQIMRMID EVCAEQGIAP
ADIDRVGVSS TGPFELRDGM VELATPNICG GIAGPARGLP NNWMTAIIEA PLARRFGRVR
VENDAVAALE AERHWGALQG LDHCAYVTWS TGVGVGLCVD GRALRGKNGN AGHAGHSFVV
DDASGALCGC GNLGDVEALV AGNSIARRFG QPAPDLFAAA SDGEPHAVEI VDALCRVMGR
MIYNLIATLD LQRISLGGSV FWHHRDFLLP RLQAQVDGKL KPLTRGVLLV PAGLGEKVGD
YAALALLD
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