Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Vapar_0977 |
Symbol | |
ID | 7971948 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Variovorax paradoxus S110 |
Kingdom | Bacteria |
Replicon accession | NC_012791 |
Strand | + |
Start bp | 1076005 |
End bp | 1077087 |
Gene Length | 1083 bp |
Protein Length | 360 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 644791573 |
Product | protein of unknown function DUF185 |
Protein accession | YP_002942894 |
Protein GI | 239813984 |
COG category | [S] Function unknown |
COG ID | [COG1565] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.247325 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCCCTCG ACATCCTGAT TGCCCGTTCG GTGGAACGGG CGGGCGGATG GATCGGCTTC GACCGTTTCA TGGCGCTGGC CCTGTATGCG CCGGGGCTGG GCTACTACGC CAACAGCTCG GCCAAGTTCG GCCACATGCC GTCTTCGGGC AGCGACTTCG TGACGGCGCC GGAGCTCACG CCCATGTTCG GCCAGGCGCT CGCGGCGCAG GTGGCCGAGG CGCTGGAGAA GACCGGCACC GACACGGTCT GGGAATTCGG CGCCGGCACG GGCGCGCTCG CCGTGCAGCT GCTGCATGCG CTCGACGAGA TCGGCCGCGG CGACGTGCGC TACCGCATCG TCGACCTGTC CGGCACCCTG CGCGAGCGCC AGCAGCAGGC ACTCGCGCGC TACACGGACC GCGTCGAATG GCTCGGCGAA CTGCCCGAGG CGATGCAGGG CGTGGTGGTC GGCAACGAGG TGCTCGATGC GATGCCGGTG CAGCTCTTGG CCCGCGTGGG CGGCCAGTGG TTCGAGCGCG GCGTGGTGCG CAACGTGCGC GCCGACGGCT GGGCCTGGGC CGACCGCGAG ACCGCGCTGC GGCCGCCGTT CGAGGTGCCC GGCGAGCACG ACTACCTGAC CGAGATCCAT CCGCAGGCCG AGGCCTTCGT CGCGACCCTG GCGGACCGCC TGAAGAGCGG CGCGGCCTTC TTCATCGACT ATGGTTTTCC GGAGCGCGAG TACTACCACC CGCAGCGCCA CATGGGCACC GTGATGTGCC ACCGCGCGCA CCAGGCCGAC GGCGATCCGC TGTCGGATGT GGGCTACAAG GACATCACGG CGCACGTCAA TTTCACCGGC ATCGCGCTCG CGGGGCAGGA GGCCGGGCTC GAGGTGCTGG GCTACACCAG CCAGGCGAGG TTCCTGCTGA ACTGCGGGCT GCTCGAGCGG ATGGGGCAGG GCAGCACGGC AGAAAGAGGC ATGGCGGCTC GGCTCGTCCA TGAGCATGAG ATGGGGGAGC TGTTCAAGGT GGTGGGGTTT GCGGTGGGGG AGGGGTGGGA GGCGATGGGG TTTGCTGAGG GGGATCGGAG TCATACGCTC TGA
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Protein sequence | MALDILIARS VERAGGWIGF DRFMALALYA PGLGYYANSS AKFGHMPSSG SDFVTAPELT PMFGQALAAQ VAEALEKTGT DTVWEFGAGT GALAVQLLHA LDEIGRGDVR YRIVDLSGTL RERQQQALAR YTDRVEWLGE LPEAMQGVVV GNEVLDAMPV QLLARVGGQW FERGVVRNVR ADGWAWADRE TALRPPFEVP GEHDYLTEIH PQAEAFVATL ADRLKSGAAF FIDYGFPERE YYHPQRHMGT VMCHRAHQAD GDPLSDVGYK DITAHVNFTG IALAGQEAGL EVLGYTSQAR FLLNCGLLER MGQGSTAERG MAARLVHEHE MGELFKVVGF AVGEGWEAMG FAEGDRSHTL
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