| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_0961 |
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| Symbol | |
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| ID | 7970136 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 1057591 |
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| End bp | 1058403 |
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| Gene Length | 813 bp |
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| Protein Length | 270 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644791557 |
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| Product | cytochrome c assembly protein |
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| Protein accession | YP_002942878 |
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| Protein GI | 239813968 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4137] ABC-type uncharacterized transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATTTTAG CGATCCCCTC CCCACTTGCC GTGGCGCTGG GCATCGCCAC CGCGGCTGCC
TATGGATTTG CCGCTGCCGC GGGCGCCAGG CTGAGCCGCA AGGCCACCCA GTGGGCCCTC
GGGCTGGCGT GGCTTCTGCA TGCCGCGGTG CTGGGCCATG GCCTCGTCGG CAGCCAGCCG
AAATTCGGCT TTGCACCGGC GCTTTCGGTC ACGGCCTGGC TGGTGCTCAC GGTCTACGCG
GTCGAAAGCC GCATGTACCC GCAGCTCAAG GTGCGCCGCG CGCTGGCCTG GCTTGGCGCG
GCCGCCGTGC TGCTGGCCAT TCTCTTTCCC GGCACGCCGC TGCATGTGTC GGCATCGCCC
TGGCTGCCGC TGCACCTTGC GCTGGGCATT GCCTCGTACG GCCTGTTCGG CGCTGCGGTG
GTCCATGCCT GGCTGATCAC GCGGGCCGAA AAGCAGATCC GCCTTGCCGC CGCCGAGCCG
CAGAGCGGCG TGCCGCTGCT CACGCTCGAG CGGCTCACCT TCCGCTTCGT GATGGCCGGC
TTCGTGCTGC TTTCCGCCAC GCTGCTCGCG GGCCTGCTGT TCAGCGAAAC GCTGTACGGC
GCGAGCGTGC GCGGCTGGAA GTGGGACCAC AAGACGGTGT TCTCGGTGCT CGCCTGGATC
AGTTTCGCGG TGCTGCTGAT CGGCCGGGTC CGCTTCGGAT GGCGCGGCCG CACGGCGCGG
CGCGTGCTGT ATGCCGGCTC CGCCCTGCTG CTGCTGGCCT ATGTGGGCTC GCGTTTCGTG
CTCGAAGTGG TGCTGGCGCG CGGCGCGACA TGA
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| Protein sequence | MILAIPSPLA VALGIATAAA YGFAAAAGAR LSRKATQWAL GLAWLLHAAV LGHGLVGSQP
KFGFAPALSV TAWLVLTVYA VESRMYPQLK VRRALAWLGA AAVLLAILFP GTPLHVSASP
WLPLHLALGI ASYGLFGAAV VHAWLITRAE KQIRLAAAEP QSGVPLLTLE RLTFRFVMAG
FVLLSATLLA GLLFSETLYG ASVRGWKWDH KTVFSVLAWI SFAVLLIGRV RFGWRGRTAR
RVLYAGSALL LLAYVGSRFV LEVVLARGAT
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