| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_0931 |
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| Symbol | |
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| ID | 7970106 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 1024358 |
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| End bp | 1025347 |
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| Gene Length | 990 bp |
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| Protein Length | 329 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 644791527 |
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| Product | phosphatidate cytidylyltransferase |
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| Protein accession | YP_002942848 |
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| Protein GI | 239813938 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4589] Predicted CDP-diglyceride synthetase/phosphatidate cytidylyltransferase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACCAGT TCCTGCGCAG CCTCACCCCG ACCCAGCAGG TCGCGGCCCT GTTCCTCATC
GTCTTCGGCC TGCTCGTGAT CGTGAGCACC ACCGCCTTCC TGCTGAGCTT CAGGGAACGG
CGCAACCCCG TGCACGACGC CGCCTGGCAG GCCGAGCTTG CGCACTACCG CAAGCTGCTG
GGCACCACCT GGTTCATGGT GATCGTGTTC TGGATCGGCT GGGCGCTGGG CGAGACCGTC
GCCACCGTGC TGTTCGCGCT CATCGCCTTC TTCGCGCTGC GCGAGTTCAT CACGCTCTCG
CCCACGCGGC GCGGCGACCA CCGCAGCCTG ATCCTGGCCT TCTTCGTCGT GCTGCCGATC
CAGTTCTGGC TCGTCGCCAC CGCGCGCTTC GACCTGTTCA CCGTGTTCAT TCCGGTCTAC
GTCTTCCTCG CGATCCCGGT CGCGAGCGCG CTGGCCGACG ACCCGAGCCA CTTTCTCGAG
CGCAACGCCA AGCTCCAGTG GGGCATCATG GTCTGCGTCT ACGGCATGAG CCATGTGCCC
GCGCTGCTGC TGCTGAGCTT TCCGGGCTAC GAAGGCAAGA ACGCCTTTCT CGTGTTCTTC
CTGGTGTTCG TGGTGCAGAC CTCGGTGCTG GTGCAGCACG TGATCTCGCG CCGCACCCAG
CGCCAGCCCT TCGCGCCCAA CGTGAGCCGC AGCTTCAACT GGACCAGCTG GGGCATCGGC
ATCGGGGTGG CCAGCCTGGT GGGCGCGCTG TTCTCGTTCA TCACGCCCTT CAGGTTCGGC
CAGGCCCTCG CGGTGTCCGT CATCGCCTGC ATCGCGGGCT CCATGGGCCA CCTGGTGATG
AAGGCGCTCA AGCGCGATCG CGGGATTCCC AACTGGGGCA AGAAGGGCGT GGGCGTCACC
GGGGCCAACG GCCTGCTCGA CCGCGTCGAT GCGCTGTGCT TCGCGGCGCC GATCTTCTTT
CACTCGATCC GCTGGTACTT CAACCTCTGA
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| Protein sequence | MNQFLRSLTP TQQVAALFLI VFGLLVIVST TAFLLSFRER RNPVHDAAWQ AELAHYRKLL
GTTWFMVIVF WIGWALGETV ATVLFALIAF FALREFITLS PTRRGDHRSL ILAFFVVLPI
QFWLVATARF DLFTVFIPVY VFLAIPVASA LADDPSHFLE RNAKLQWGIM VCVYGMSHVP
ALLLLSFPGY EGKNAFLVFF LVFVVQTSVL VQHVISRRTQ RQPFAPNVSR SFNWTSWGIG
IGVASLVGAL FSFITPFRFG QALAVSVIAC IAGSMGHLVM KALKRDRGIP NWGKKGVGVT
GANGLLDRVD ALCFAAPIFF HSIRWYFNL
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