Gene Vapar_0898 details

Gene Information

• Locus tag: Vapar_0898
• ID: 7970073
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Variovorax paradoxus S110
• Kingdom: Bacteria
• Replicon accession: NC_012791
• Strand: +
• Start bp: 988312
• End bp: 988971
• Gene Length: 660 bp
• Protein Length: 219 aa
• Translation table: 11
• GC content: 70%
• IMG OID: 644791494
• Product: DSBA oxidoreductase
• Protein accession: YP_002942815
• Protein GI: 239813905
• COG category: [Q] Secondary metabolites biosynthesis, transport and catabolism
• COG ID: [COG3917] 2-hydroxychromene-2-carboxylate isomerase

Plasmid Coverage information

• Num covering plasmid clones: 23
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACGACCA AGCCGACCAC CCCCGCCATC GCGCTCGACT GCTACTACAG CCTTTCCTCG 
CCCTGGGCCT ACCTGGGCGG GCCACAGCTG CAGGACATCG TGCGGCGCCA CCATGTGCGG 
CTCACGCTCA AGCCCTACGA CTTCCAGGCC GTGGTGCCGC AGACCGGCGG CATTCCGCTG 
AAGACGCGGC CCGAGCCGCG CCGCAGCTAT CACGCGCTCG AACTGGCGCG CTGGCGCGAC 
TACCTCGGCA TGCCGCTCAA CCTGGAGCCC GCCTACTACC CCAAGGGTGC GCCGGTCGAT 
CCGAACTGGA ACAAGTACCC GGGCTGGATG GTGATCGCCG CGCAATTGCA GGGGCTCGAT 
GCCCAGCCGC TCTCGCATGC GCTGCTGCGC GCGCTGTGGG CCGAGGAACG CGACACCTCC 
GAAGCCGCGG AGCGCATCGC GGTGGCCGAG GAAAACGGCT ACGACGGCGC GGCGCTGCAG 
GCGCTGGAGC AGGCGCCCGA AACCTTGGCG GTCTACCGCG CCAACAGCGC CGACGCCATC 
CAGGCCGGCG TGTTCGGCGC GCCGACCTTC GTGCTCGACG GCGAGCGCTT CTGGGGGCAG 
GACCGCCTGG CCTTTCTGGA CCGGGCGCTC GACAGGCGCC GCCAAGCCAC GGGCGGATAA 

 

Protein sequence

MTTKPTTPAI ALDCYYSLSS PWAYLGGPQL QDIVRRHHVR LTLKPYDFQA VVPQTGGIPL 
KTRPEPRRSY HALELARWRD YLGMPLNLEP AYYPKGAPVD PNWNKYPGWM VIAAQLQGLD 
AQPLSHALLR ALWAEERDTS EAAERIAVAE ENGYDGAALQ ALEQAPETLA VYRANSADAI 
QAGVFGAPTF VLDGERFWGQ DRLAFLDRAL DRRRQATGG