Gene Vapar_0897 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVapar_0897 
Symbol 
ID7970072 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVariovorax paradoxus S110 
KingdomBacteria 
Replicon accessionNC_012791 
Strand
Start bp987917 
End bp988294 
Gene Length378 bp 
Protein Length125 aa 
Translation table11 
GC content71% 
IMG OID644791493 
Producthypothetical protein 
Protein accessionYP_002942814 
Protein GI239813904 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCCATCC TCCCTCCATC CGGTTTCATC TTTTTCCCTC GTACCCGCGG CATCCTGGCG 
GCCGCCGTTT GCGCCGCGTC GATGTTTATC GCGGGCTGCC AGACACAGCC CGAATTCCGC
CCGCTCACCT CCGAGGCGCC GCCGCCGCCC ACCTTCGTGA CCGTGCCCAG CGAAGAAACC
TGCCAGGCCG CGCAGGCGCG CTATGCGCTC GGCCAGGCGC TCGATCCGCT GCTGCTGGAG
CAGATGCGCA CGCGCACCGG TTCCAAATCG GCGCGCACCT CGGCCGTCGG CGCGCCGCTG
CCGGTGCCGG CCGATCCGGC GCGGCTCAAT GTCGACGTCG ATCCGCAGGG GCGCATCACC
GCCGCGCGCT GCGGCTGA
 
Protein sequence
MPILPPSGFI FFPRTRGILA AAVCAASMFI AGCQTQPEFR PLTSEAPPPP TFVTVPSEET 
CQAAQARYAL GQALDPLLLE QMRTRTGSKS ARTSAVGAPL PVPADPARLN VDVDPQGRIT
AARCG