Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Vapar_0897 |
Symbol | |
ID | 7970072 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Variovorax paradoxus S110 |
Kingdom | Bacteria |
Replicon accession | NC_012791 |
Strand | + |
Start bp | 987917 |
End bp | 988294 |
Gene Length | 378 bp |
Protein Length | 125 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 644791493 |
Product | hypothetical protein |
Protein accession | YP_002942814 |
Protein GI | 239813904 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCCATCC TCCCTCCATC CGGTTTCATC TTTTTCCCTC GTACCCGCGG CATCCTGGCG GCCGCCGTTT GCGCCGCGTC GATGTTTATC GCGGGCTGCC AGACACAGCC CGAATTCCGC CCGCTCACCT CCGAGGCGCC GCCGCCGCCC ACCTTCGTGA CCGTGCCCAG CGAAGAAACC TGCCAGGCCG CGCAGGCGCG CTATGCGCTC GGCCAGGCGC TCGATCCGCT GCTGCTGGAG CAGATGCGCA CGCGCACCGG TTCCAAATCG GCGCGCACCT CGGCCGTCGG CGCGCCGCTG CCGGTGCCGG CCGATCCGGC GCGGCTCAAT GTCGACGTCG ATCCGCAGGG GCGCATCACC GCCGCGCGCT GCGGCTGA
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Protein sequence | MPILPPSGFI FFPRTRGILA AAVCAASMFI AGCQTQPEFR PLTSEAPPPP TFVTVPSEET CQAAQARYAL GQALDPLLLE QMRTRTGSKS ARTSAVGAPL PVPADPARLN VDVDPQGRIT AARCG
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