Gene Vapar_0867 details

Gene Information

• Locus tag: Vapar_0867
• ID: 7972083
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Variovorax paradoxus S110
• Kingdom: Bacteria
• Replicon accession: NC_012791
• Strand: +
• Start bp: 953944
• End bp: 956022
• Gene Length: 2079 bp
• Protein Length: 692 aa
• Translation table: 11
• GC content: 73%
• IMG OID: 644791465
• Product: Fusaric acid resistance protein conserved region
• Protein accession: YP_002942786
• Protein GI: 239813876
• COG category: [S] Function unknown
• COG ID: [COG1289] Predicted membrane protein

Plasmid Coverage information

• Num covering plasmid clones: 19
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCCGCCT TCCAGCTGCC GCGCTTCAGC CGCGCGGAGC TTCTCTTTTC TGCCAAGAGC 
TTTGCCGCCG CGATGCTGGC CATGTACCTG GCCAGCCGCG CCGGCCTGCC GCGTCCGTTC 
TGGGCCTTGA TGACCACCTA CGTGGTGGCC CATCCGCTGG CCGGCGCGGT GCGCTCCAAG 
GCGCTCTACC GCTTCTGCGG CACCTTGATC GGCTGCGTGG CCACGGTGCT GCTGGTGCCT 
GCCTTGTCGA ACGCGCCGGA GCTGCTCACG CTGGTGCTCG CGCTGTGGGT GGGCCTGTGC 
CTGTGCATTT CGCTGTTCGA CCGCACGCCG CGTTCCTACG TCTTCATGCT GGCGGGCTAC 
ACCGCCGCGC TGATCGGCTT TCCTTCGGTG CAGACGCCGC TCGCGCTGTT CGACACCGCG 
GTGGCGCGGG TGGAGGAAAT CGGCCTGGGC ATCCTGTGCG CCACGCTGGT CCACAGCATT 
GCGTGGCCCA CGGGGCTGGC GCCGACCGTG CTGGGCCTGC TCGACCGTAC GCTGCAGGAC 
GCGCGCCAGT GGCTCGGCGA CCTGCTGCAG CCCGCCGGAC GCCGCGCCGA TGCCGATCCG 
CAAACGCTCG CGGCCGACCG CCGCCGCCTG GCCGGCGACA TCACCCAGCT GCGGCTGCTG 
TCCACCCACG TGCCGTTCGA CACCACGCAT CTGCGCTGGA CCGCCGGCGC GATCCGCGCC 
ATGCAGGACC GCGTGGCCGC GCTCACGCCC GCGCTGTCGG CCGTGGAGGA CCGGCTGCTG 
GCGCTGGAAC AGGCCGACGG CGCGCTGGCG CCGGACGTCG CCGCGGTGCT CGCGCAGGCC 
GCGCAATGGC TGCAGGAAGA CGATGCAGCG CGCGCGCAGT CGCTGCAGCT GCTGCGCCGC 
TCGATCCAGG CGCTGGGCGC GACGCCGCAG CACAGTCCCT GGAGCCGCGC CTTGCGCATC 
GGGCTCGCGG GCCGGCTCGA GGAACTGGTC GAGGGATGGC GTGCCTGCGC GCGGCTGCGC 
ATGGACATCG ACGAGGGCCT CCAGGGCGCG CTTGCGCCGC GCCGCACGGC CGCGCTCGGC 
AGCCGCGTGC TGCACCGCGA CTACGGCATG GCGCTGCTGT CGGCGCTGGC CGCGGTGCTT 
GCCATCTGCC TGTGCGGCGC CTTCTGGATC GTGACGGGCT GGCCCATGGG CTCGGCCGCC 
ACCATGATGG CCGCGGTCTT CTGCTGCTTC TTCGCGACCA TGGACGACCC GGTGCCCGCG 
ATCCACGGCT TCCTGAAGTA CACGCTGTGG TCGATTCCGG TCTCCGCCCT CTATGTGCTG 
GTGCTGATGC CGCTGGTGCA GGACTTCGGC ATGCTGGTGG CGGTGTGCGC GCCGGCCTTC 
CTGCTGCTGG GCGTCTACAT GGCGCGGCCG GCGCATTTCA TGGCGGCCAT GGCGCTGCTG 
TTCGGCGTGG CCGGCACGCT GGCCATGCAC GACACCGCCA ATGCCGACCT GGTGAGCTTC 
ATCAACAGCA TGCTCGGCCA GGTCATCGGC GTGGTGGTTG CCGCGCGCGT CACGCGGCTG 
GTGCGCTCCG TGGGCGCGGA CTGGAGCGCG CGGCGCATCC AGCGCGCCAC CTGGCGCGAG 
CTCGGCGAGA TGGCCGGCGC TGCGCAGCGC CAGGGCGCGC AGGGCGACGC CTACGCCGTG 
CGCATGCTCG ACCGCATCGG CCTGCTCGCA CCGCGCATCG CGCAGGCCGG CGGCAGCATC 
GAGGGCGTGG CCGCCAACGA CGCGCTGCGC GACCTGCGCA CCGGCGCCGA CATCGACGTG 
CTGCAGCGGG TGCGCGCGCA GCTGCCGCCG GCCTCGGCCG CGGCGCTCCT GGGCGGCATC 
TCGCAGTTCT TCCGCCAGCG CGGCAGGGGC CGCATGCAAG CGCGCCCCGC CGGCCTGCTG 
CCGCAGATCG ACGAGGCGCT GTCGGCCGTG CTTGGCGTGC AGCATGCGCC GTCATCCGCA 
TCGCGCAGCG CAGTGACCGC GCTGGTGGGC CTGCGCCGCA ATCTTTTTCC CGATGCACCG 
CCGCGCCTGG CCGTGGCCGG ACAAGGAGCC TCCAGATGA 

 

Protein sequence

MAAFQLPRFS RAELLFSAKS FAAAMLAMYL ASRAGLPRPF WALMTTYVVA HPLAGAVRSK 
ALYRFCGTLI GCVATVLLVP ALSNAPELLT LVLALWVGLC LCISLFDRTP RSYVFMLAGY 
TAALIGFPSV QTPLALFDTA VARVEEIGLG ILCATLVHSI AWPTGLAPTV LGLLDRTLQD 
ARQWLGDLLQ PAGRRADADP QTLAADRRRL AGDITQLRLL STHVPFDTTH LRWTAGAIRA 
MQDRVAALTP ALSAVEDRLL ALEQADGALA PDVAAVLAQA AQWLQEDDAA RAQSLQLLRR 
SIQALGATPQ HSPWSRALRI GLAGRLEELV EGWRACARLR MDIDEGLQGA LAPRRTAALG 
SRVLHRDYGM ALLSALAAVL AICLCGAFWI VTGWPMGSAA TMMAAVFCCF FATMDDPVPA 
IHGFLKYTLW SIPVSALYVL VLMPLVQDFG MLVAVCAPAF LLLGVYMARP AHFMAAMALL 
FGVAGTLAMH DTANADLVSF INSMLGQVIG VVVAARVTRL VRSVGADWSA RRIQRATWRE 
LGEMAGAAQR QGAQGDAYAV RMLDRIGLLA PRIAQAGGSI EGVAANDALR DLRTGADIDV 
LQRVRAQLPP ASAAALLGGI SQFFRQRGRG RMQARPAGLL PQIDEALSAV LGVQHAPSSA 
SRSAVTALVG LRRNLFPDAP PRLAVAGQGA SR