| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_0807 |
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| Symbol | |
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| ID | 7971859 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 890513 |
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| End bp | 891397 |
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| Gene Length | 885 bp |
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| Protein Length | 294 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 644791405 |
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| Product | transcriptional regulator, LysR family |
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| Protein accession | YP_002942726 |
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| Protein GI | 239813816 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCCAACC GTCTCGAAGC CCTGCGCGTG TTCTGCACTG CCGCCGCTGC CGCCAACTTC
CGCGAGGCCG CCGCGCGCCT GTCCGTCTCG CCGCAGGTCG TGACGCGCGC GGTGCGCGAG
CTGGAAGAAG AACTGGGCGA GCCGCTGTTC CACCGCAGCA CGCGCGGCGT GCAGCTCACC
GACTTCGGCC GGCAATTGGC CGAGCGCGCC CGCGTGGCGG TAGGCAGCGT CGACGAGCTG
TTCCACCAGA TCGACCGGCG CACGCTGTCG CAGCATGCGG GCACGGTGCG GGTCACGGCG
CCGCACGTGT ACGCCCGGCT CATCCCGCAG GCGCTGGCGC CGCTGCTGGC GGCGCACCCC
GGGCTGGTGC TCGACCTGCG CCTGTCGGAG CAGCATGCCG ACGTGGTCGA CGAGCAGATC
GACATCGGCG TGCGCGTGGG GCCGATGCGC GACGCGCGCT TCGTGGCACG CGCCGTCGGC
AAGATGGCGC TGCATGTGGT GGCAGCGCCG GCGCTCATCG AAAGAGTGGG CCGGCCGCAG
GGCCTCGATG CGCTTGCGGC GCTGCCGCTC ACCGCGCTGA TCGACCGCAG CTCGGGCCGC
CCCTGGCCGT GGGCCTTCAG CAGGCGGCGG GTGGTGACGG TGTCCTCGCC CGCCTTCGTG
ACCGACAGCA TCGATGCCGA ATGCGCCGCT GTGCTCGCGG GCGTGGGCTT CGGGCAGCTG
ATCGGGCCGC TGGCGGAACC GTGGCTGCGC ACAGGCGCGA TGCTGCCCGT GCTGGAGGCC
GAGGCGCCCG AGCCCTGGCC GATCCACGTC TACCGCCCGC AGCGTGCGCC GGTGCCGGCA
CGCGTGCGGC TGGTGTACGA CGAGCTGGTG CGGGTGCTGC GTTGA
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| Protein sequence | MANRLEALRV FCTAAAAANF REAAARLSVS PQVVTRAVRE LEEELGEPLF HRSTRGVQLT
DFGRQLAERA RVAVGSVDEL FHQIDRRTLS QHAGTVRVTA PHVYARLIPQ ALAPLLAAHP
GLVLDLRLSE QHADVVDEQI DIGVRVGPMR DARFVARAVG KMALHVVAAP ALIERVGRPQ
GLDALAALPL TALIDRSSGR PWPWAFSRRR VVTVSSPAFV TDSIDAECAA VLAGVGFGQL
IGPLAEPWLR TGAMLPVLEA EAPEPWPIHV YRPQRAPVPA RVRLVYDELV RVLR
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