| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_0781 |
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| Symbol | |
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| ID | 7971833 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 863205 |
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| End bp | 864092 |
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| Gene Length | 888 bp |
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| Protein Length | 295 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 644791379 |
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| Product | protein of unknown function DUF6 transmembrane |
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| Protein accession | YP_002942700 |
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| Protein GI | 239813790 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCTGAAG CCGTGTCCCA GGTGCGGCGC GCGCCGTCCA CGCTGCAGAC CGTCGCGCTG
ACCGCGGTGG CCATGGTCGC GTTCGCGGCC AATTCGCTGC TGTGCCGGCT CGCGTTGCAG
CAGCGGGGCA TCGACCCGGC CAGCTTCGGC AGCATCCGGC TGGTTGCCGG TGCGCTCACG
CTCGCGCTCG TCGTGCAGTT CCGCGCCCGG CCTGCCGCGC CCGGCCGTGC CGACTGGCTC
GCGGCCGCCA TGCTGTTCGC CTACGTCGCG TTCTTTTCCT TCGCTTACCT CAGCCTCTCC
GCGGGCACGG GCGCGCTGAT TTTGTTCGGC GCGGTGCAGC TCACGATGCT GGGCGCGGGC
CTGGGTTCGG GCGAGCGCTT CGGGCCTGTG GCATGGATCG GCTTCGTGCT GGCGGCCGGC
GGGCTCGTCT ACCTGGTGCT GCCGGGCGTC GCAGCGCCGC CGCTTGTCGG CGCCGTGCTG
ATGGCCGTCG CGGGCGTGGC ATGGGGCGTG TATTCGTTGC GCGGCCGCGG CGTGCCCGAT
CCGCTGGCCG CCACCGGCCG CAACTTCTTG CGGGCCGTGC CGCTGGCGCT GGCGCTGAGC
CTTGCCTTCA TGATGCGCGC CCATGCGGAT GCGACCGGCA TCGCGCTGGC CGTGGCCTCC
GGCGCATTGA CCTCGGGCCT CGGCTATGTC GTCTGGTATG CGGCGCTCGC GCGCCTGTCG
GCCATGCAGG CGGCCACCGT GCAGCTGTCG GTGCCGCTCC TGGCTGCGTT CGGCGGCGTG
CTGCTGCTGT CGGAGGCGAT CACGCCGCGG CTGGCGGCGG CCTCGGTGGC CATCCTGGGC
GGCATTGCGA TCGTGCTGAG CCAGAAGTCG CGCAAGGCGC GGCGCTAG
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| Protein sequence | MSEAVSQVRR APSTLQTVAL TAVAMVAFAA NSLLCRLALQ QRGIDPASFG SIRLVAGALT
LALVVQFRAR PAAPGRADWL AAAMLFAYVA FFSFAYLSLS AGTGALILFG AVQLTMLGAG
LGSGERFGPV AWIGFVLAAG GLVYLVLPGV AAPPLVGAVL MAVAGVAWGV YSLRGRGVPD
PLAATGRNFL RAVPLALALS LAFMMRAHAD ATGIALAVAS GALTSGLGYV VWYAALARLS
AMQAATVQLS VPLLAAFGGV LLLSEAITPR LAAASVAILG GIAIVLSQKS RKARR
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