| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_0730 |
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| Symbol | |
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| ID | 7974530 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 800710 |
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| End bp | 802863 |
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| Gene Length | 2154 bp |
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| Protein Length | 717 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 644791329 |
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| Product | cytochrome c biogenesis protein, transmembrane region |
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| Protein accession | YP_002942650 |
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| Protein GI | 239813740 |
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| COG category | [C] Energy production and conversion
[O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG4232] Thiol:disulfide interchange protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCGGCTG CGGCCCAATT GGCATCCAGG CCGGGCGCGG TGGTCACCAC CCCTCACGTG
CGCGCCGAAT TGGTGGCGCA TGCGCCCGAA GGCGTTGCGC CGGGCGCACC GGTCTGGGTC
GGCCTGCAGA TCACCCACCA GCCCGAGTGG CACACCTACT GGAAGAACGC CGGCGATTCG
GGCCTGCCCA CCGAGCTGAA CTGGACGCTG CCGAGCGGCG TGGCCGCGGG CGAGATCGCC
TGGCCGGTGC CGCGCAAGAT CCCGGTCGGC AACCTCGCCA ACTACGGCTA CGAAGGCACG
GTGCTGCTGC CGGTGCCGCT CGAGGTGTCG AGCAACTTCA AGCCGCCGCT GGCGCTGGGC
GCCGGCGCCT CGGCGCTCGA CGTGCGGCTC AAGGCCAGCT GGCTGGTGTG CCGCAAGGAA
TGCATTCCCG AGGAAGGCGA ATTCACCCTG GCCCTGCCGC TGCAAGGCTC GACCGCGCTG
CACAAGGCCG AGTTCGACGC GGCGCAGGCC GCGCAGCCGC AGCCGCTGGC CAAGCCGGGC
GCGGTCGAGG TCAGCGGCAA CAACCTGCAG GTGCGCCTCG ATGGCCTGCC CGCCTCGGCC
CGCGGCAAGA CCCTGGGCTT CTTCCCCGAA ACGCCCGAGT TGATCCGCAC CGCCGCCGAA
TCGGGCAAGG ACTGGACCCA GAACTGGCAA GGCGGCACCT GGACCGCCAC GCTGCCGCTG
GCCGACCAGC GCAGCGCCAG CCCGACGACC CTGCCGCTGG TGGTGGCGCT GGCCGAGGCC
GACCGGCAGC CGGGCCAGCC CGTTGCCTGG CGCACCGAGG CGCCCGTCAG CGGCAGTTGG
CCGGCCGCGG CGCCGCGCGC GGAGGTCTCG CCCGCGCTGC AGGCGGCTCT GGCCGCCAAT
GCGGCCGCCG CGCCTTCGTC GCCTTCTTCG GATCTGCCGC CGCAACCCAC GGTCACGCTG
ATGGCCGCGC TGCTCGGCGC GCTGCTCGGC GGACTGCTGC TGAACCTCAT GCCCTGCGTC
TTCCCGATCC TGGCGATCAA GGTGCTGGGC TTCGCGCGGC AGGCCGGCAA CCACAGCGCG
CACCGCACCG CGGGCCTGGC CTACACCGCC GGCGTGATGC TCTCGGTGCT TGCGCTGGGC
GGCGCCATGC TGGCGCTGCG CGCGGCCGGC GCCCAGCTCG GCTGGGGCTT CCAGCTGCAA
TCGCCGGCCG TGGTGGCGGC GCTCGCGGCG CTGTTCACGC TGATCGGACT CAACCTCGCG
GGCCTGTTCG AATTCGGCCG CGCCGCGCCC CTGTCGCTGT GCTCGGCGCA GGCCCGCCAT
CCGATTGCCA ACGACTTTCT TTCGGGCGTG CTGGCGGTGG TGATCGCTTC GCCCTGCACC
GCGCCGTTCA TGGGCGTTTC GCTCGGCTTT GCCATCGGGC TTCCCGCCAC CCAGGCGCTG
CTGCTGTTCG CCGCGCTGGG CCTGGGCCTG GCGCTGCCGT ACCTGGTGGC GGGCTTCATT
CCGGCCGTGG CGCTGCTGCT GCCCAAGCCC GGCCCCTGGA TGAACACGCT GCGCCGGCTG
CTGGCGTTCC CGATGTTCGC CACCGTGGCC TGGCTGGTCT GGGTGCTGGG CCAGCAAAGC
GGCATCGATG GCGCAGGCAC CCTGCTCGCG CTGCTGGTGT GCATGGCCGC GATCGTCTGG
GCGCTGACGC TGCGCGGCCG CACGCGGCTG GTGATTGCCA CGCTGATGGT CGCATTCACC
GCGGTGCTGG CCGCCGCCAT CGGGCGCAAC GTGCTGCAGA CGGTGGAGCC GGCCAGGATG
GCGGCCACCG CGGGGCAGCG CTGGCAGCCC TGGTCGGCCG AGCGCGTGGC CGAGCTCACG
GGCGCCGGGC AGCCGGTGTT CATCGACTTC ACGGCCGCCT GGTGCGTGAC CTGCCAGTAC
AACAAGAAGG CCACCCTGGC GGATGCCGAG GTGCTGGCCG ATTTCGACAG CAAGAAGGTC
GCGATGCTGC GCGCCGACTG GACGCGCCGC GACCCGGCCA TCACCGCCGC GCTGACCGCG
CTCGGCCGCA GCGGCGTGCC GCTGTACGTG CTGCAGGCGC CCGGCAAGGC GCCGGTCGTG
CTGACCGAGA TCCTGGGCAA GGACGAGGTG CGCGCCGCGC TTGCCGCGCT TTGA
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| Protein sequence | MPAAAQLASR PGAVVTTPHV RAELVAHAPE GVAPGAPVWV GLQITHQPEW HTYWKNAGDS
GLPTELNWTL PSGVAAGEIA WPVPRKIPVG NLANYGYEGT VLLPVPLEVS SNFKPPLALG
AGASALDVRL KASWLVCRKE CIPEEGEFTL ALPLQGSTAL HKAEFDAAQA AQPQPLAKPG
AVEVSGNNLQ VRLDGLPASA RGKTLGFFPE TPELIRTAAE SGKDWTQNWQ GGTWTATLPL
ADQRSASPTT LPLVVALAEA DRQPGQPVAW RTEAPVSGSW PAAAPRAEVS PALQAALAAN
AAAAPSSPSS DLPPQPTVTL MAALLGALLG GLLLNLMPCV FPILAIKVLG FARQAGNHSA
HRTAGLAYTA GVMLSVLALG GAMLALRAAG AQLGWGFQLQ SPAVVAALAA LFTLIGLNLA
GLFEFGRAAP LSLCSAQARH PIANDFLSGV LAVVIASPCT APFMGVSLGF AIGLPATQAL
LLFAALGLGL ALPYLVAGFI PAVALLLPKP GPWMNTLRRL LAFPMFATVA WLVWVLGQQS
GIDGAGTLLA LLVCMAAIVW ALTLRGRTRL VIATLMVAFT AVLAAAIGRN VLQTVEPARM
AATAGQRWQP WSAERVAELT GAGQPVFIDF TAAWCVTCQY NKKATLADAE VLADFDSKKV
AMLRADWTRR DPAITAALTA LGRSGVPLYV LQAPGKAPVV LTEILGKDEV RAALAAL
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