Gene Vapar_0712 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVapar_0712 
Symbol 
ID7974675 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVariovorax paradoxus S110 
KingdomBacteria 
Replicon accessionNC_012791 
Strand
Start bp776084 
End bp776461 
Gene Length378 bp 
Protein Length125 aa 
Translation table11 
GC content65% 
IMG OID644791311 
Producthistone family protein DNA-binding protein 
Protein accessionYP_002942632 
Protein GI239813722 
COG category[L] Replication, recombination and repair 
COG ID[COG0776] Bacterial nucleoid DNA-binding protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAACCGTA TCGAACTGGT CGAGAAGATC GCCACCGCCC ACAACGTCAG CAAGGCCGAA 
GCCGCCCGCA TCCTGGAAAC CGTCACGGGT TCCATCGTCG CCGCAGTGAA GAAGGGCGAC
CCCGTGCAGC TCATCGGCTT CGGAACCTTC AAGCAAGTGG CGCGCGCCGC ACGCACCGGC
TTCAACCCGC AAGCCGGCGC CAAGATCAAG ATCGCCGCGC AGAAGGTGCC CAAGTTCGTG
CCGGGCGCTG CGTTCAAGGC CGCCATCGAC CCCAAGGCTG CAAAGCGCAA GGCCGACAAG
GCCGCGGCAG CCAAGCCCGC CAAGAAGGCA GCACCGGCCA AGAAGGCCGC ACCCGCCAAG
AAGGCTGCCA AGAAGTAA
 
Protein sequence
MNRIELVEKI ATAHNVSKAE AARILETVTG SIVAAVKKGD PVQLIGFGTF KQVARAARTG 
FNPQAGAKIK IAAQKVPKFV PGAAFKAAID PKAAKRKADK AAAAKPAKKA APAKKAAPAK
KAAKK