Gene Vapar_0704 details

Gene Information

• Locus tag: Vapar_0704
• ID: 7974667
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Variovorax paradoxus S110
• Kingdom: Bacteria
• Replicon accession: NC_012791
• Strand: +
• Start bp: 765816
• End bp: 767972
• Gene Length: 2157 bp
• Protein Length: 718 aa
• Translation table: 11
• GC content: 69%
• IMG OID: 644791303
• Product: Fibronectin type III domain protein
• Protein accession: YP_002942624
• Protein GI: 239813714

Plasmid Coverage information

• Num covering plasmid clones: 15
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCATCAGT CACAAAGCGA AAACAACAAC AGCCATCCCC TGGACCGCCG CGCATTCTGC 
GTGGGCGCCG TGAGTCTCGC CGCCCTTGGC ACCACCGCGT GTGGAGGAGG TGGTGGCGGC 
GGTGGCGGCG GTGGCGGCGG CGTGGCGGGC GGCTTCGGCG CGCTGGGCGG CAGTGCGCCG 
CAGGCAGATG CATCAACCCC GGCGGCGGCC CCGCCCGCCG CGCCCGATGC GCCGGCCGCG 
CCCGACGCGG CGCCCTCCGC ACCGCAGGCG CGCAAGTTCG TGCACCCCGG CCTGCTGCAC 
ACCGAGGCCG ACTTCGAGCG CATGCGCCAG AAGGTCGCGG CCAATGCGCA GCCCTGGGTC 
GCCGGCTGGA ACGCGCTCAC GTCCAATGGC CGTTCGCAGC TCGGCGCCAA GCCGCGGCCG 
CTGGCCACGG TGATTCGGGG GGACGTCCCG GGCCAGAACT TCGCGCAGTT CTACATCGAC 
GTCGCGCGCG CCTACCAGCT CGCGCTGCGC TGGAAGGTTT CTCAGGACAC GCGCTATGCC 
GACCTTGCCG TGGTCTTCCT GAACGAGTGG TCCTCCACGC TGAAAGAGGT CACGGGCAAT 
GCGGATCGCT TTCTTGCGGC GGGCATCTAC GGCCAGCAGT TCGCGAATGC GGCCGAGATC 
ATGCGGTCCT ATCCGGGATG GGCGGCCAGC GATTTCGCGC GCTTCCAGAA CATGATGCTC 
ACGGTGTTCT ATCCGCTCAA CCACGACTTC CTCACCAGGC ACAACGGTGC GGTGATCACC 
AACTACTGGG CCAACTGGGA CCAGTGCGCG CTGGGCTCGA TCCTGGCCAT CGGCGTGCTG 
TGCGACCGGA CGGACCTCTA TGACGAGGCG ATCAGCTACT ACAAGACGGG CCAGGGCAAT 
GGCGCCGGCC TGCAGGCGGT CTACCACGTG CATCCCGGCT ACCTCGGCCA GTGGCAGGAG 
AGCGGCCGCG ACCAAGGGCA CTGCACGCTG GGCATCGGCC TGGCGGGCGC ATTCTGCGAG 
ATGGCCTGGA ACCAGGGCGA CGACATCTAC GGCTACGAGA ACAACCGCTT CCTTGCCGGC 
GCCGAGTACG TGGCCAAGTC CAATCTGCAG GACGGCGCCG GCAACTTCTA CACCGTGCCC 
TTTCTCACCA GCGCCAACCG GCAGGGAACG AAGACCGTGC TGGGGGACGG CCTCGGCCAC 
CGGCGCGGCA TCTGGGAAAG CGTCTACAAC CACTATGCGA ACCGGCTGGG CATCGCCACG 
CCCTACACCG CGCTGCAGGC CGCGCAGATG CGGCCCGAGC TGGACGGCAG CAACGGCGAC 
CAGCTCGGCT TCGGCACGCT CACCTACACG CGCGATCCGA TCACGACGCC GCTGCGGCCG 
AGCGGGCTCA CCGCGCGCGT GCATGGACCG CAGGTCGAGC TCTCGTGGTG GGGCTGCACC 
GGCGCGCTGA GCTATTCGGT CAAGCGCGCC ACGATGGTGG GCGGCCCGTA TGCCACGGTG 
GCCACGGGCA TCAGCGATAC GCTGACCTTC ACCGACAGCA CCGTCGCGCC CGGCGTGGTG 
TACCACTACG CGGTGGTGGC GCTGACCGCG GCCGGAGAAA GCAAGCCCTC CGACGAGGCC 
CGCGCCGCCA TCAAGGCCGA GCTGCTGCTG CAGCGCGACT TCAGCGAAAC GCAGGCGGCC 
GCCGACTATG CCGAGCTCCC CGTGGGCGTG GTCAAGGACG TGGCCGACTT CACCATCGCA 
TGCCGGGTGT TCCTGGACGA GATCTCGACT TGGTCGCGTG TCTTCGACTT CGGCTCCGGC 
GAGCGCCGCT ACATGATGCT CACGCCGCGC AGCGACACCG GCAAGGTGCG CTACGCCATC 
TCGCCGGTCC ATGGCTACAA CATGCAGATG ATCGAAGGCG CGTCGCCGCT GCCGACCGGC 
CGCTGGGTGC ATGTGGCGGT GACCCTGTCC GGCACGCTCG GCACGCTTTA CATCGACGGC 
GCGGTGGCCG GCAGCAATGC GCAGATGAGC TTCGCACCCT GCGAGCTCGG CGAGACGACG 
CAGAACCTGC TCGGGCGTTC GCAGTATCCG AACGACCCGC CGCTGCGCGG GCGCCTCGGC 
GATTTCCGCA TCTACCAGGG CGCGCTGGGT GCCGCGGAGG TTGCGGCGCT GGTGTAG 

 

Protein sequence

MHQSQSENNN SHPLDRRAFC VGAVSLAALG TTACGGGGGG GGGGGGGVAG GFGALGGSAP 
QADASTPAAA PPAAPDAPAA PDAAPSAPQA RKFVHPGLLH TEADFERMRQ KVAANAQPWV 
AGWNALTSNG RSQLGAKPRP LATVIRGDVP GQNFAQFYID VARAYQLALR WKVSQDTRYA 
DLAVVFLNEW SSTLKEVTGN ADRFLAAGIY GQQFANAAEI MRSYPGWAAS DFARFQNMML 
TVFYPLNHDF LTRHNGAVIT NYWANWDQCA LGSILAIGVL CDRTDLYDEA ISYYKTGQGN 
GAGLQAVYHV HPGYLGQWQE SGRDQGHCTL GIGLAGAFCE MAWNQGDDIY GYENNRFLAG 
AEYVAKSNLQ DGAGNFYTVP FLTSANRQGT KTVLGDGLGH RRGIWESVYN HYANRLGIAT 
PYTALQAAQM RPELDGSNGD QLGFGTLTYT RDPITTPLRP SGLTARVHGP QVELSWWGCT 
GALSYSVKRA TMVGGPYATV ATGISDTLTF TDSTVAPGVV YHYAVVALTA AGESKPSDEA 
RAAIKAELLL QRDFSETQAA ADYAELPVGV VKDVADFTIA CRVFLDEIST WSRVFDFGSG 
ERRYMMLTPR SDTGKVRYAI SPVHGYNMQM IEGASPLPTG RWVHVAVTLS GTLGTLYIDG 
AVAGSNAQMS FAPCELGETT QNLLGRSQYP NDPPLRGRLG DFRIYQGALG AAEVAALV