| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_0691 |
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| Symbol | |
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| ID | 7974654 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 751021 |
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| End bp | 752109 |
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| Gene Length | 1089 bp |
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| Protein Length | 362 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644791290 |
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| Product | MscS Mechanosensitive ion channel |
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| Protein accession | YP_002942611 |
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| Protein GI | 239813701 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0668] Small-conductance mechanosensitive channel |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAACGCT GCTGGGGGCT GCCGGTGCCC GATCTGGCGC TGGCGGTGGC CGCCGCGCTT
GCCGCCTACC TGGCAATGCG GCTGGTGCTG CGCTACATGA TCGGGCGCAT GCGCGGCATC
GCGCAGCACA CGAGCAATCG CATCGACGAC ACGGTGGTCG AAGTGCTGGC CGGCACCAAC
CGCGCATTCC TGGTGCTGGC CGCGCTGCTC GTCGGCGTGG GCATGCTCGA GTTGCCCGAG
CGCTGGAACC AGCGCGTTGG GCAGCTGTGG TTCATTGCCG TTGCGCTGCA GGCGGGCCTG
TGGTTCACCC GGGCCATCGG CTTCGGGCTG CGCCGCTACG AGCAGCGCCA CTCCTCCGCG
AGCATGACGC AGGTCAGCGC ATCGGCCACG CTGATGTCGT GGTCGATGCG CACCGTGCTG
TGGGCAGTGA TCCTGCTGGC GGTGCTGTCG AACCTGGGCG TCAACATCAC CGCCTTCGTC
GCCAGCCTGG GCGTGGGCGG CATTGCGATT GCGCTTGCGA TGCAGAACAT CCTGGGCGAC
CTGTTCGCCT CGCTGTCCAT CGCGGTCGAC AAGCCATTCG AGGTGGGCGA TGCGATCGGT
GTCGGCGGGC TCTCGGGCAC GGTGCAGCAC GTGGGCCTCA AGACCACGCG GCTGCGCAGC
CTGAGCGGCG AGCAGATCGT GATCGGCAAC ACCGACCTGC TCAAGCAGAC CGTGAAGAAC
TATCGCCGCA TGGACGAGCG CCGCATTGCC TTCAAGTTTG GCGTGAGCTA CCGCAGCACG
CCCGAACAGC TGGAGGCCAT ACCGGGCATC GTGAAGCGGT TGATCGAGTC GCGGCCGTCG
CTGCGGCTGG ACCGCGTGCA CTTCCAGGCC TTCGGCGAGA GCTCGCTCGA CTTCGAGGTC
GTGTACTTCG TGACCACGCC GGACTACGGG CTCTACATGG ACGAGCAGCA GCGCCTCAAC
CTGCAGATGA TGCGCGAGTT CGCGCGGCTG GGCGTGGAGT TTGCGATTCC GGCGCGATCC
CTGCACGTGC TGTCGCCCGA GGGACGGCGC GCGGTGGCGA AGGAACTGGC CACTCAGGAG
GAAGAGTAG
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| Protein sequence | MQRCWGLPVP DLALAVAAAL AAYLAMRLVL RYMIGRMRGI AQHTSNRIDD TVVEVLAGTN
RAFLVLAALL VGVGMLELPE RWNQRVGQLW FIAVALQAGL WFTRAIGFGL RRYEQRHSSA
SMTQVSASAT LMSWSMRTVL WAVILLAVLS NLGVNITAFV ASLGVGGIAI ALAMQNILGD
LFASLSIAVD KPFEVGDAIG VGGLSGTVQH VGLKTTRLRS LSGEQIVIGN TDLLKQTVKN
YRRMDERRIA FKFGVSYRST PEQLEAIPGI VKRLIESRPS LRLDRVHFQA FGESSLDFEV
VYFVTTPDYG LYMDEQQRLN LQMMREFARL GVEFAIPARS LHVLSPEGRR AVAKELATQE
EE
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