| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_0686 |
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| Symbol | |
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| ID | 7974649 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 745880 |
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| End bp | 747298 |
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| Gene Length | 1419 bp |
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| Protein Length | 472 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 644791285 |
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| Product | integrase family protein |
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| Protein accession | YP_002942606 |
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| Protein GI | 239813696 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGACCA AGCTGACCCT GACCGCTGCA CGGGTAGAGA ACCTGCCCTG CGAGCCCGGC
AAACAACAGA CCATCCATTG GGACGCCAAG ACCCCCGGCT TCGGCTTGCG GGTCACGGTG
GCCGGCGCGC GCGCCTATAT CTTCGAGTCC CGCCTGTTCG GCAAGACGCT GCGCGTCACA
ATCGGGGACG CACGCGCCTG GGAGTTGGGC CGGGCGCGCA CGGAAGCCAG CCGCCTCAAG
ATGCTCGTGA ATGAGGGCAA GGACCCCAGG GAGGTGAAGG CCGAGCAGCG CCAGGCCTTG
GAGGCCCGCC GAGAAGAGGC CGCACGCCAG GATGTGCTCT TTGGTCAGGC GTGGGACGCC
TACATCGAGG AGCGCAAGCC GTTTTGGAGC GAACGTCACT ACCGCGACCA CGTGCAGCAC
GCCTCGGAAG GCGGGGTGGC CAGGAAGCGG GGACAGGGCC TCACTCAGGC TGGTCCGCTG
GCTGCGCTGC GCCCGCTGCG GCTCCCGGAC CTCACGGGAA CTCGCATCGC GCAATGGCTC
ACGGCCGAGA CCGCCACCCG CCCGACGATG ACCGCCCTGT CGTTTCGGCT GCTGCGAGGC
TTCATTCGCT GGGCCAAGGA CACGCCGGCC TACAAGGGAC TCATTCCCGC CGACAGTTAC
CAAACGCGTT GCGTGAAGGA CGCCGTCCCG CGCGTAAAAG CCAAAGAGGG CGACTGCCTG
CAGCGCGAAC AGTTGGCCTC CTGGTTCGCC AGCGTGCGCG AGATCCCCAA CCCGGTCATC
AGCGCGTATC TCCAAGGCCT GCTCCTCACG GGCGCGCGGC GCGAAGAGTT GGCGGCGCTG
CGCTGGGAAG ACGTGGATTT CCGCTGGCGC GGCCTGACAC TCAATGACAA GGTGGAAGGG
ACGGGCGGAC GGACCATCCC TCTCACTCCC TACCTGGCGA GCCTGTTGCT CGAACTCAAG
CGGCTGAATG AAGTACCGCC GACTCGGCGG CAAATCAGAC GCCTCGAAGC ACAAGGCCGC
ACCTGGAGCC CTTCACCCTG GGTCTTTCCA AGCCCGACCT CAGCAGATGG TAGGCTCGCC
GAGCCGCGCA GCGCCCACAC CAAGGCGCTT GAGCAGGCCG ACTTGCCGCA CGTCACGTTG
CACGGCCTGC GCCGATCGTT CGGCACATTG TCCGAATGGT GCGAGGCGCC GGCCGGTGTC
ATTGCGCAGA TCCAGGGGCA CAAGCCCAGC GCGATCGCCG AAAAGCACTA CCGCCGCCGA
CCACTCGACC TGTTGCGCAA GTGGCATGAC CAGATTGAGG CTTGGATTTT GACCGAGGCT
GGCGTCGAAT TCACCACCAG GCACGCACCC CAAACACCGA AAAACCATGA AATCAACGAG
CTTCACGATA CAAGAGCTAA AGAAGCTGGA CAGCCTTAA
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| Protein sequence | MTTKLTLTAA RVENLPCEPG KQQTIHWDAK TPGFGLRVTV AGARAYIFES RLFGKTLRVT
IGDARAWELG RARTEASRLK MLVNEGKDPR EVKAEQRQAL EARREEAARQ DVLFGQAWDA
YIEERKPFWS ERHYRDHVQH ASEGGVARKR GQGLTQAGPL AALRPLRLPD LTGTRIAQWL
TAETATRPTM TALSFRLLRG FIRWAKDTPA YKGLIPADSY QTRCVKDAVP RVKAKEGDCL
QREQLASWFA SVREIPNPVI SAYLQGLLLT GARREELAAL RWEDVDFRWR GLTLNDKVEG
TGGRTIPLTP YLASLLLELK RLNEVPPTRR QIRRLEAQGR TWSPSPWVFP SPTSADGRLA
EPRSAHTKAL EQADLPHVTL HGLRRSFGTL SEWCEAPAGV IAQIQGHKPS AIAEKHYRRR
PLDLLRKWHD QIEAWILTEA GVEFTTRHAP QTPKNHEINE LHDTRAKEAG QP
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