| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_0668 |
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| Symbol | |
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| ID | 7974631 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 729091 |
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| End bp | 730362 |
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| Gene Length | 1272 bp |
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| Protein Length | 423 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 644791270 |
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| Product | major facilitator superfamily MFS_1 |
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| Protein accession | YP_002942591 |
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| Protein GI | 239813681 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG2223] Nitrate/nitrite transporter |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.202105 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCAAAGG TCATGTCAGC GTCAGCCTTA GCGCCAGGCA ACATACGTTC ACACCAGATT
GTCGCAATCG TGTGTTGCCT GGTCGCGGAA TTCTTCTTGG CCGCGGACTG GTATGCGTTT
GCCGCCGTCA TGTCATTCGT CTCTGCAGAC CTGGCCCTGA CTCCGGGCCA AGCCGGATTG
GCTCAGGGCG TCTTCGGATT GTCGTACTGC ATGGGCATGT TGGTCTGGTC TCCGCTCGTC
AGGCGTATCG ATGGACGCGC GGCGTTCTCG ATAGGCCTCC TTGGCACTGG AATTTTCATG
GGAGCGCAAG CGCTCAGTTC CAGCTTTTCG GAGCTCTTGG TGTACCGGTC GGTGGTCGGA
TTCTTCGATG CGGCGGTCTG GATTGGTGCG ATGAGACTGA TCATCGGCTG GTTTCCAGAG
AAGCGCCATG GCTCCGCCAT CGGAGCACTA CTCGCCTCAT ACAGCCTCGC AATCACCCTC
GACTTCGCTG TGGGGGTCCC TCTGGCGCAC GCCCAGGGCT GGCGAGTCTT CTTCTACGGC
CTCGCTCTTG GAACTGTCAT AGTGGCGATT GTGGGTTGGC TGATTCTGCG GGATGCGCCT
CTCGGATCGA ACAGCATCTC GTCCGACGGT GCGCGTGTTT CCGCGCAGGG CGTGTCGTCG
CGGTCCGTAT TCGCCTCCAA GTGGCTCTAC GTCGGCGCAG CGGCAATATT CGGTGCAACG
TTCGCCCTGT CGGCAACAGC CACTTGGGTA GTGCCCGCCT TTGTCGTGGT CCGTCAGATG
CCATTAGAGC GTGCTGCGGT GATTGGCAGC GCCATGGGGT TGTCGCAAAT CGTGATTCTG
CTGATCGGAG GCTTGCTTGC CGATCGGGTC GATCGGCTGA TCATGGTTAA GGTGGGCGCC
GCTTTGGCAG CTGCATCAGC GCTCATATTT ATGGTGGTGT TGACTCAGGC CGTGCCGTGG
GGCGCTTTGA TCGCAGTCGC GATTTTCAGC GGTGTTGCTG TTCTAAGCGG AGGAGCGATC
TTCAGTGCCT TGAGCGAGCG ATTCGGCAAA GAACTGGCCG CGAGCGCAAT CGGCTACGCG
CAGATCGGAG GCGTTCTCTC AAGCTTCGTC GCACCTGCGG CCATGGGCTG GATCATCGAG
CGCAGCGGGG GCTCGTTCCT AGCCGCGTTT GGATTATTTG CGGGCGTCGA ATTGGCCGTA
CTCGCGATCC TGCTCACGCT AGCCCGCGAT CCCGCGCAGC TCGCGTCCAA GGGACTGAAA
TCCTCCCTCT GA
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| Protein sequence | MSKVMSASAL APGNIRSHQI VAIVCCLVAE FFLAADWYAF AAVMSFVSAD LALTPGQAGL
AQGVFGLSYC MGMLVWSPLV RRIDGRAAFS IGLLGTGIFM GAQALSSSFS ELLVYRSVVG
FFDAAVWIGA MRLIIGWFPE KRHGSAIGAL LASYSLAITL DFAVGVPLAH AQGWRVFFYG
LALGTVIVAI VGWLILRDAP LGSNSISSDG ARVSAQGVSS RSVFASKWLY VGAAAIFGAT
FALSATATWV VPAFVVVRQM PLERAAVIGS AMGLSQIVIL LIGGLLADRV DRLIMVKVGA
ALAAASALIF MVVLTQAVPW GALIAVAIFS GVAVLSGGAI FSALSERFGK ELAASAIGYA
QIGGVLSSFV APAAMGWIIE RSGGSFLAAF GLFAGVELAV LAILLTLARD PAQLASKGLK
SSL
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