| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_0663 |
|---|
| Symbol | |
|---|
| ID | 7974626 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Variovorax paradoxus S110 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012791 |
|---|
| Strand | + |
|---|
| Start bp | 725621 |
|---|
| End bp | 726007 |
|---|
| Gene Length | 387 bp |
|---|
| Protein Length | 128 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 644791266 |
|---|
| Product | transposase IS3/IS911 family protein |
|---|
| Protein accession | YP_002942587 |
|---|
| Protein GI | 239813677 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG2963] Transposase and inactivated derivatives |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.667805 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACAAGC GAGTCACTTC GGGCAAGGAC ACCCGGCGCA GGCACAGCGA AGAGCTGAAG
CAGGAATTGG TCGAGCGCAG CCTGGAACCT GGCGCGTCAG TCGCTGCCAT CGCGCAGGCG
CATGGCATCA ATGCGAACCT CTTGTTCAAC TGGCGTCGAC TTCGATTGCG CGCGCAAGCT
CCAGTAGTCG AGGGCACTGC GCCGGCCACG CTCTTGCCGG TTACCGTGCA GATGGAGCCT
GCAGCGCAGA CCAACAAGGC CGTTGTGCCG CGCCCTTCGA GCGGCGTGAT CGAGATCGAC
GTGGGTGCCA CACGTGTTCG TCTGCGCGGA GCCGTCGATG AGACCAGCGT GCGTTGCGTG
CTGCGCCTGC TCGGTGCCAT CGCGTGA
|
|---|
| Protein sequence | MNKRVTSGKD TRRRHSEELK QELVERSLEP GASVAAIAQA HGINANLLFN WRRLRLRAQA
PVVEGTAPAT LLPVTVQMEP AAQTNKAVVP RPSSGVIEID VGATRVRLRG AVDETSVRCV
LRLLGAIA
|
|---|
| |