| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_0660 |
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| Symbol | |
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| ID | 7974623 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 721813 |
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| End bp | 722712 |
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| Gene Length | 900 bp |
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| Protein Length | 299 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 644791263 |
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| Product | transcriptional regulator, LysR family |
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| Protein accession | YP_002942584 |
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| Protein GI | 239813674 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATCGAA TACAGGGCAT GGCTACATTC CTAGTGGTCG TAGAGACCGG TGGCTTCGCG
TCTGCCGCAC GCCGGCTCAA AGTGTCGCCC TCGGTCGTCA CGCGTGCCGT CAGCGAGCTC
GAGGAACGCT TAGGCGTAAG ACTATTGACG CGCACCACGC GTTCCGTCAG GGTCACAGAG
GCGGGAATGA GTTACGCAGA AAGCTGCCGG AGAATCCTCG TGGACATTGA GGAAGCCGAC
AGCGCAGCCG CTGGTGCGCG CACATCGCCG CGAGGCCAAA TCACCGTTAC GTCATCAGTG
AACTTCGGAT GCATGTATGT CTCACCGATT GCGCGCAACT ATCTATCTCT ATTTCCTGAG
GTCGAAATCA ACTGCTGGTT TGTAGACAGG GTGGTCAACT TGGTGGACGA GGGGGTGGAT
GTCGCGATAC GTATTGGCGA GTTGCCTGAC TCTTCATTAC AAGCTATCAA GGTTGGCCAA
GTACGCGAGG TTCTTTGCGC ATCGCCAACT TATCTGCGAC AACATGGAAC GCCGAAACGC
CCCCAAGACC TGTCGCAGCA TGTCGTCATA GCCGCCACGG GAGTAACGCC AACGCCCGAG
TGGAGGTTCC GGGATAGCAG CAAGTCCGCG ACGATACGAC TGCAGCCGCG ATTTACAACC
ACAATGAATG AGGCTGCGGC CGAGTGCGCT ACTGCAGGGT TCGGCATCAC GCGCTTGCCG
CTTTATCAGA TCGCAAGGGG AGTGAAGGAA GGGTCTCTTG CGCTGGTGCT CGAAGACTTC
GAGCGCCCGG CCGTGCCGAT ACACGTTGTG CACCGCGAAG GCCGGCACGG TGCCCGCAAG
GTGCGCACCT TCATCGACAT GGCGATCGAG GCACTACGGA ACGACTTGGA CCTGCAGTAG
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| Protein sequence | MDRIQGMATF LVVVETGGFA SAARRLKVSP SVVTRAVSEL EERLGVRLLT RTTRSVRVTE
AGMSYAESCR RILVDIEEAD SAAAGARTSP RGQITVTSSV NFGCMYVSPI ARNYLSLFPE
VEINCWFVDR VVNLVDEGVD VAIRIGELPD SSLQAIKVGQ VREVLCASPT YLRQHGTPKR
PQDLSQHVVI AATGVTPTPE WRFRDSSKSA TIRLQPRFTT TMNEAAAECA TAGFGITRLP
LYQIARGVKE GSLALVLEDF ERPAVPIHVV HREGRHGARK VRTFIDMAIE ALRNDLDLQ
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