Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Vapar_0657 |
Symbol | |
ID | 7974620 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Variovorax paradoxus S110 |
Kingdom | Bacteria |
Replicon accession | NC_012791 |
Strand | - |
Start bp | 716616 |
End bp | 717038 |
Gene Length | 423 bp |
Protein Length | 140 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 644791260 |
Product | thioesterase superfamily protein |
Protein accession | YP_002942581 |
Protein GI | 239813671 |
COG category | [R] General function prediction only |
COG ID | [COG0824] Predicted thioesterase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCCATC CGCATTTTGA AGTGGAGCAC CGCATCCGGT TCTCCGAGTG CGATCCCGCT GGCATCGTGT TCTACCCGCA GTACTTCGTG CTGTTCAACG ACCTCATGGA GGCCTGGATC GACACACTGC TGCCTGAGGG CTTCGCAGGC ACCGTCGGCC AAAGGCGCTG CGGCCTGCCC ACCGTGCACC TCGAGGCCGA CTTCAAAGCC ATCAGCCGCA TGGGCGACGA GGTCGTGCTG TCGATCGAAC TCGAGCGCCT GGGCAACAAA TCGCTGAACC TCGCGCTCGC GTGTACTGGC GTGGACGGTG TGCTTCGCAT GACCGTAAAG CAGACGGTGG TGACCACGTC GCTCGACACA CATGCCGCCA TCCCCGTCCC CGACCACCTG CGGCAGGCGC TGTCGGCCGC ACATCCCCAC TGA
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Protein sequence | MTHPHFEVEH RIRFSECDPA GIVFYPQYFV LFNDLMEAWI DTLLPEGFAG TVGQRRCGLP TVHLEADFKA ISRMGDEVVL SIELERLGNK SLNLALACTG VDGVLRMTVK QTVVTTSLDT HAAIPVPDHL RQALSAAHPH
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