| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_0634 |
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| Symbol | |
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| ID | 7973619 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 690732 |
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| End bp | 691706 |
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| Gene Length | 975 bp |
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| Protein Length | 324 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644791241 |
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| Product | inner-membrane translocator |
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| Protein accession | YP_002942562 |
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| Protein GI | 239813652 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4177] ABC-type branched-chain amino acid transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGCCTGG ACGCCCCCCG GGAGCGCGGC TTCGGCGCCC CCGCTTTCGT GCCCTGGATC
GTGCTGGCGG TCCTGGCCTC GCTGCCCCTG TGGGCCGCCG CCACCGACCA GTACTACTAC
CTCGACTTCG CGCGCCGCAT CCTCATCGTC GTGCTCGCCA CCGCCAGCCT GAACCTGCTG
GTCGGCTACT GCGGCATGGT GGCGCTAGGA CACGCCGGCT TCGTCGGCGT CGGCGCCTAC
ACGGTGGCCG CCTTCGTCGA GGCGGGCGTG CAATCGGCTT GGACGCTGTG GGCTCTGAGC
GGCGTGTGCG CCGGCCTGGT AGCCTGCCTG ATGGGCACGG TGGCGCTGCG CACGCGCGGC
GTGTACTTCA TCATGATCAC GCTGGCCTTC GCGCAGCTGC TGTACTACCT CGCAGTGTCC
ATGCGCATCT ACGGCGGCGA TGATGGCTAC AACCTGCCGT TTCGGCCGCA AGTCGGCCCG
GGCCTGAGCC TGGACGACAG CGCCACCTTC TTCTGGCTCG TGCTGGCCTT CGCCGCGGCC
TGCTTCGCGG GCCTGCAGTA CCTGCTTGGC AGCCGCTTCG GCAAGGCCTT GTGCGGCATA
CGCGACAACG AGGCGCGCAT GACCGCGCTG GGCTATCCGG TCTTCCGGCT GCGCCTGGCC
GCGTTCACGC TGGCGGGCGC GATCGCGGGC TTGTCGGGCT CGCTGCTCAT CATGCACAAC
GGCTTCATCA GCCCCTCGAG CATCCACTGG TCGCAATCCT CCATCCTGCT GGTCATGCTG
GTGCTCGGTG GCGTCGCGCG CCCCTGGGGC GCGGCCATCG GCACCACGGT GTGGATGGTG
CTCGAAGAGG TGCTGCGTCA ATCCACCGAG TACTGGCACT GGCCGCTCGG CGCCCTGCTG
ATCCTGATCG TGCTGGCGGC GCCGCAGGGG CTGGCCCAAC TCCATCGGCG CGGCAAGCCC
GCAACCGCCC ACTGA
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| Protein sequence | MRLDAPRERG FGAPAFVPWI VLAVLASLPL WAAATDQYYY LDFARRILIV VLATASLNLL
VGYCGMVALG HAGFVGVGAY TVAAFVEAGV QSAWTLWALS GVCAGLVACL MGTVALRTRG
VYFIMITLAF AQLLYYLAVS MRIYGGDDGY NLPFRPQVGP GLSLDDSATF FWLVLAFAAA
CFAGLQYLLG SRFGKALCGI RDNEARMTAL GYPVFRLRLA AFTLAGAIAG LSGSLLIMHN
GFISPSSIHW SQSSILLVML VLGGVARPWG AAIGTTVWMV LEEVLRQSTE YWHWPLGALL
ILIVLAAPQG LAQLHRRGKP ATAH
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