| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_0633 |
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| Symbol | |
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| ID | 7973618 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 689960 |
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| End bp | 690715 |
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| Gene Length | 756 bp |
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| Protein Length | 251 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644791240 |
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| Product | ABC transporter related |
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| Protein accession | YP_002942561 |
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| Protein GI | 239813651 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0411] ABC-type branched-chain amino acid transport systems, ATPase component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.622953 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCCAAGC CTCTCTTCTC CACCCAAGGT CTGCGCAAGT CCTTCCCCGG CCTGCTGGCG
ACCGACAACG TCAGCATTGA TGTGCACCCT GGCCAGGTCC ATGCGCTCAT TGGCCCCAAC
GGCGCCGGCA AGAGCACTCT GGTCAACCTG ATCTCGGGCC TGCTGCCCGC CGATGAGGGT
CGCATCACGC TCGACGGCCG CGAACTGCAA GGCCTGTCCG CGCACGCCCG CGTGCGCGCC
GGCCTCTCGC GCTGCTTCCA GGTGACCAGC ATCTTTCCGG GCGCCAGCGT GCTCGACAAC
CTGCGCCTCG CCGCGCAGTC GCACCTGCCG GGCTACTGGC ACCCCTGGGG CCGTCGCGAC
CGGCACGCCG AGATCAACGA ACACGCGCTC GACCTCGCGC AGATGGTGGG CCTCGAAGGC
CGCCTGACCC ACACCGCGGG CGCCCTGCCG CACGGCGCCC AGCGCCAGCT CGACGTGGCG
CTGGCGCTCG CGGCGCGGCC CAGGCTGCTG CTGCTCGACG AGCCCATGGC CGGCATGGGG
CAAGACGAGT CGGAACGCGT GGCCCTGTTG ATCGAAAAGC TGCGCCAGTC GATGGCGATC
CTGCTGATCG AACACGACAT GCACGCCGTC TTTCGTCTGG CCGACCGCAT CTCCGTGCTG
GTGTACGGCC GGGTGATGGC CTCGGGCACG CCCGATGAGA TCCGCAACAA CGAACAGGTC
CGGGACGTAT ACCTGGGCAG CGAGGTGAAC GCATGA
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| Protein sequence | MAKPLFSTQG LRKSFPGLLA TDNVSIDVHP GQVHALIGPN GAGKSTLVNL ISGLLPADEG
RITLDGRELQ GLSAHARVRA GLSRCFQVTS IFPGASVLDN LRLAAQSHLP GYWHPWGRRD
RHAEINEHAL DLAQMVGLEG RLTHTAGALP HGAQRQLDVA LALAARPRLL LLDEPMAGMG
QDESERVALL IEKLRQSMAI LLIEHDMHAV FRLADRISVL VYGRVMASGT PDEIRNNEQV
RDVYLGSEVN A
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