| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_0621 |
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| Symbol | |
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| ID | 7973606 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 677411 |
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| End bp | 678241 |
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| Gene Length | 831 bp |
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| Protein Length | 276 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644791228 |
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| Product | ABC transporter related |
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| Protein accession | YP_002942549 |
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| Protein GI | 239813639 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1116] ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGGCATATG GCGAAATCAA CCGAGCCCGA AAGGTGTTCT CAGCCCAAGA ACTCGGGGGC
GAGGCCACGG AAGATCTGGT AGCGCTGGAC GACGCGTCGT TCACCTTCGA GCAAGGCGAG
TTTGTTGCCC TGCTCGGTCC CAGCGGATGC GGGAAAACGA CCTTGCTGCG CATCGTCGCC
GGCCTCACGG GGCTCACATC GGGCACGGTG CGTATCGGCG GGCGCGACGT GAACGGCCCC
TACGGGGACT ACGGCTTCGT GTTCCAGGCG CCTGGTCTGA TGCCCTGGCG CAGCGTGCTG
GACAACGTGC TATTCCCGAT GGAGATCCTT AAGCGCAATG ACGCTGCCGC GCGCAAGCGG
GCGCGCGACC TGCTGACCCT GGTGGGGCTG GAGGCCTTCG AGCGCGCCCG CCCGCACCAG
CTCTCGGGCG GCATGCAGCA GCGCGTGTCC TTGTGCCGCG CTCTGATCCA CGAGCCCAAG
CTGCTGCTCA TGGACGAGCC TTTCGGCGCC CTGGACGAGC TGACGCGCCT GGACATGAAC
GACCTTTTGC TCGACGTGCG CAAGAAGACC GGTGCCGCAG TGCTGTTCGT GACCCACTCG
ATCTCGGAGG CGGTCTACCT CGGCGACAAG GTCCTGGTGT TCAGCCGCCG CCCCGCGCGG
GTGGCGATGG AGATCCGGCC CGACCTGGGC AACAACCGCC ACCGCGGCAT GCGCTTCGAC
GAGGGCTTCG CCCAGGCGCA ACGCGAGGCC GGCGAGGCCC TCGGCGTCAT CACCCCCCAC
GACACCACCA CCCACACGAC CGCCCCGCGC GCCCAGGAAG CCCACCCATG A
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| Protein sequence | MAYGEINRAR KVFSAQELGG EATEDLVALD DASFTFEQGE FVALLGPSGC GKTTLLRIVA
GLTGLTSGTV RIGGRDVNGP YGDYGFVFQA PGLMPWRSVL DNVLFPMEIL KRNDAAARKR
ARDLLTLVGL EAFERARPHQ LSGGMQQRVS LCRALIHEPK LLLMDEPFGA LDELTRLDMN
DLLLDVRKKT GAAVLFVTHS ISEAVYLGDK VLVFSRRPAR VAMEIRPDLG NNRHRGMRFD
EGFAQAQREA GEALGVITPH DTTTHTTAPR AQEAHP
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