| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_0601 |
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| Symbol | |
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| ID | 7973586 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 659559 |
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| End bp | 660587 |
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| Gene Length | 1029 bp |
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| Protein Length | 342 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644791209 |
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| Product | phage/plasmid-related protein |
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| Protein accession | YP_002942530 |
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| Protein GI | 239813620 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR03299] phage/plasmid-related protein TIGR03299 |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCACACC AAATCGAACA GATGGCCTAC GTCGGCGACA CCCCCTGGCA CCGCCTGGGT
CATCGCCTCC CGTCCAGACA GCCCCTGGAG GTCTGGGCCC AGCAAGCCGG CATGGACTGG
ACCATCCAGG AAACCCCTGT GCGCTTCATG ACCGATGGAG TTCCTGCTGG TGACGACTCT
GCCGACGGCG ACTCCCTCCA GACCCTCGAA TCCTTCGCCG AACAGAAGGT CCTCTACCGC
AGCGACACCC GCGCGCCGCT GTCGGTCGTC AGCAGCCGCT ACCAAGTCGT TCAGCCCCGC
GAAGTCCTGG AGTTCTACCG CGACCTCACC GAGATCGGCG GCTACGAGAT GGAAACCGCC
GGCGTCCTCA AGGGCGGGCG CAAGGTCTGG GCACTCGCTC GCACCGGCCA GCAGGCCGTG
CTCAAGGGAA ACGACATCGT CAACGGCTAT CTCCTGTTGG CGACTTCCTG CGACGGCACC
CTGGCCACCA GCGTGACCCC GACCACGGTG CGGGTCGTGT GCAGCAACAC CCTGGCGGTG
GCGCTGGATG CCACGAGCAA CGTCATCCGG GTGCCCCACA GCACGAGCTT CGATCCGGAC
GCCGTCAAGC GCCAGCTCGG CATCGCTATT GGGCAGTGGG ACGAGTTCAT GTACCGCATG
AAGACCCTGT CACAGCGCAA GGTCAAGACC AAGGAGGCCC TGCAGTACAT CGAGCGAGTG
CTGTACGGCC CTTCCGAGCT CAATCCGGCC GATGACGTCA GCACTCAAGC GGCGCAGACC
GAGGCATCGC CCGCACCGCG CGGCTGGGCC GCCCGGAAAG TCCTGGAGCT GTACGAGGGC
AGGGGCCGTG GGGCCGAACT CGCGGCGGCC AAGGGGACGA CCTGGGGCCT GCTCAGTGCG
ATGACGGAGT TCGTCGACCA CGAGCGCCGT GCCCGCAACC GCGAGTACCG CCTCGACAGC
GCCTGGTTCG GCCAGGGTGC GGCCTTGAAG CAGCGAGCCC TCGAGCAAGC GCTCGCGCTC
GCCAGATGA
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| Protein sequence | MAHQIEQMAY VGDTPWHRLG HRLPSRQPLE VWAQQAGMDW TIQETPVRFM TDGVPAGDDS
ADGDSLQTLE SFAEQKVLYR SDTRAPLSVV SSRYQVVQPR EVLEFYRDLT EIGGYEMETA
GVLKGGRKVW ALARTGQQAV LKGNDIVNGY LLLATSCDGT LATSVTPTTV RVVCSNTLAV
ALDATSNVIR VPHSTSFDPD AVKRQLGIAI GQWDEFMYRM KTLSQRKVKT KEALQYIERV
LYGPSELNPA DDVSTQAAQT EASPAPRGWA ARKVLELYEG RGRGAELAAA KGTTWGLLSA
MTEFVDHERR ARNREYRLDS AWFGQGAALK QRALEQALAL AR
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